Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3S2P59780 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3S2P59780 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3S2P59780 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
AP3S2P59780 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 AC067852.2-201ENST00000590513 2313 ntBASIC16.42■□□□□ 0.22
AP3S2P59780 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
AP3S2P59780 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP3S2P59780 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP3S2P59780 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.42■□□□□ 0.22
AP3S2P59780 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AP3S2P59780 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
AP3S2P59780 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AP3S2P59780 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AP3S2P59780 IRS3P-201ENST00000223076 1006 ntBASIC16.41■□□□□ 0.22
AP3S2P59780 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3S2P59780 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3S2P59780 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.41■□□□□ 0.22
AP3S2P59780 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 AC104187.1-201ENST00000607510 612 ntBASIC16.41■□□□□ 0.22
AP3S2P59780 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.41■□□□□ 0.22
AP3S2P59780 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3S2P59780 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3S2P59780 ANO7L1-203ENST00000602586 1720 ntBASIC16.41■□□□□ 0.22
AP3S2P59780 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
AP3S2P59780 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.41■□□□□ 0.22
AP3S2P59780 CROCCP1-201ENST00000426910 5675 ntBASIC16.41■□□□□ 0.22
AP3S2P59780 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
AP3S2P59780 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AP3S2P59780 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S2P59780 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.4■□□□□ 0.22
AP3S2P59780 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 OR6D1P-203ENST00000641209 4860 ntBASIC16.4■□□□□ 0.22
AP3S2P59780 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.4■□□□□ 0.22
AP3S2P59780 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.4■□□□□ 0.22
AP3S2P59780 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.4■□□□□ 0.22
AP3S2P59780 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S2P59780 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S2P59780 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms