Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP4BP1P59074 AC073508.3-201ENST00000619697 1419 ntBASIC21.8■■□□□ 1.08
CHMP4BP1P59074 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 RCC2P6-201ENST00000526625 1557 ntBASIC21.8■■□□□ 1.08
CHMP4BP1P59074 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.8■■□□□ 1.08
CHMP4BP1P59074 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP4BP1P59074 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 HLA-A-209ENST00000638375 975 ntBASIC21.79■■□□□ 1.08
CHMP4BP1P59074 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP4BP1P59074 AP000974.1-201ENST00000623909 2387 ntBASIC21.79■■□□□ 1.08
CHMP4BP1P59074 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 EGLN1P1-201ENST00000531623 762 ntBASIC21.78■■□□□ 1.08
CHMP4BP1P59074 WWOX-216ENST00000569818 525 ntBASIC21.78■■□□□ 1.08
CHMP4BP1P59074 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 DGCR10-201ENST00000609839 495 ntBASIC21.78■■□□□ 1.08
CHMP4BP1P59074 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHMP4BP1P59074 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 AC008040.2-201ENST00000461049 708 ntBASIC21.77■■□□□ 1.08
CHMP4BP1P59074 AC128688.1-201ENST00000487626 519 ntBASIC21.77■■□□□ 1.08
CHMP4BP1P59074 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 AP005242.2-201ENST00000580065 1175 ntBASIC21.77■■□□□ 1.08
CHMP4BP1P59074 AC130371.2-201ENST00000619443 611 ntBASIC21.77■■□□□ 1.08
CHMP4BP1P59074 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP4BP1P59074 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CHMP4BP1P59074 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms