Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.67■□□□□ 0.42
PER3P56645 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 UPK3BP1-201ENST00000428678 509 ntBASIC17.67■□□□□ 0.42
PER3P56645 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.67■□□□□ 0.42
PER3P56645 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.67■□□□□ 0.42
PER3P56645 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.67■□□□□ 0.42
PER3P56645 WWOX-216ENST00000569818 525 ntBASIC17.67■□□□□ 0.42
PER3P56645 AC026271.3-201ENST00000571884 352 ntBASIC17.67■□□□□ 0.42
PER3P56645 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.67■□□□□ 0.42
PER3P56645 DGCR10-201ENST00000609839 495 ntBASIC17.67■□□□□ 0.42
PER3P56645 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.67■□□□□ 0.42
PER3P56645 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PER3P56645 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PER3P56645 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.67■□□□□ 0.42
PER3P56645 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PER3P56645 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PER3P56645 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PER3P56645 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.66■□□□□ 0.42
PER3P56645 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.66■□□□□ 0.42
PER3P56645 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.66■□□□□ 0.42
PER3P56645 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.66■□□□□ 0.42
PER3P56645 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.66■□□□□ 0.42
PER3P56645 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PER3P56645 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PER3P56645 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 AC116562.4-201ENST00000641316 2276 ntBASIC17.65■□□□□ 0.42
PER3P56645 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
PER3P56645 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.65■□□□□ 0.42
PER3P56645 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.65■□□□□ 0.42
PER3P56645 AK4P3-201ENST00000418260 669 ntBASIC17.65■□□□□ 0.42
PER3P56645 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.65■□□□□ 0.42
PER3P56645 BX664615.1-201ENST00000443558 458 ntBASIC17.65■□□□□ 0.42
PER3P56645 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.65■□□□□ 0.42
PER3P56645 AC010203.1-204ENST00000548782 407 ntBASIC17.65■□□□□ 0.42
PER3P56645 AP005242.2-201ENST00000580065 1175 ntBASIC17.65■□□□□ 0.42
PER3P56645 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.65■□□□□ 0.42
PER3P56645 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PER3P56645 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PER3P56645 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.65■□□□□ 0.42
PER3P56645 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.65■□□□□ 0.42
PER3P56645 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PER3P56645 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PER3P56645 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PER3P56645 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.64■□□□□ 0.42
PER3P56645 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PER3P56645 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.64■□□□□ 0.41
PER3P56645 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PER3P56645 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.64■□□□□ 0.41
PER3P56645 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PER3P56645 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PER3P56645 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.64■□□□□ 0.41
PER3P56645 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.64■□□□□ 0.41
PER3P56645 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.64■□□□□ 0.41
PER3P56645 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.64■□□□□ 0.41
PER3P56645 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
PER3P56645 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.64■□□□□ 0.41
PER3P56645 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.64■□□□□ 0.41
PER3P56645 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.64■□□□□ 0.41
PER3P56645 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.64■□□□□ 0.41
PER3P56645 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.64■□□□□ 0.41
PER3P56645 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.64■□□□□ 0.41
PER3P56645 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.64■□□□□ 0.41
PER3P56645 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms