Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH8P55286 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH8P55286 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH8P55286 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH8P55286 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH8P55286 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH8P55286 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CDH8P55286 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 TSPY21P-201ENST00000433481 731 ntBASIC20.41■□□□□ 0.86
CDH8P55286 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.41■□□□□ 0.86
CDH8P55286 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH8P55286 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDH8P55286 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH8P55286 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH8P55286 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH8P55286 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDH8P55286 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDH8P55286 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH8P55286 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH8P55286 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 AC087499.1-201ENST00000418141 1075 ntBASIC20.4■□□□□ 0.86
CDH8P55286 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH8P55286 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH8P55286 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH8P55286 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH8P55286 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH8P55286 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH8P55286 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.39■□□□□ 0.86
CDH8P55286 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH8P55286 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH8P55286 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH8P55286 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH8P55286 AP005242.2-201ENST00000580065 1175 ntBASIC20.39■□□□□ 0.85
CDH8P55286 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH8P55286 AC073912.3-201ENST00000624414 853 ntBASIC20.39■□□□□ 0.85
CDH8P55286 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CDH8P55286 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.39■□□□□ 0.85
CDH8P55286 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CDH8P55286 IRX1P1-201ENST00000438849 1838 ntBASIC20.39■□□□□ 0.85
CDH8P55286 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH8P55286 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH8P55286 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH8P55286 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CDH8P55286 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH8P55286 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH8P55286 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH8P55286 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH8P55286 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH8P55286 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH8P55286 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 AL049812.1-201ENST00000432563 2267 ntBASIC20.38■□□□□ 0.85
CDH8P55286 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH8P55286 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDH8P55286 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH8P55286 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDH8P55286 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDH8P55286 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH8P55286 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH8P55286 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CDH8P55286 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH8P55286 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH8P55286 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH8P55286 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms