Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
EPHB4P54760 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EPHB4P54760 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
EPHB4P54760 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.46■■□□□ 1.03
EPHB4P54760 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
EPHB4P54760 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
EPHB4P54760 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 FP700111.2-201ENST00000619190 1892 ntBASIC21.46■■□□□ 1.03
EPHB4P54760 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.46■■□□□ 1.03
EPHB4P54760 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
EPHB4P54760 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
EPHB4P54760 KRT18P38-201ENST00000449496 1282 ntBASIC21.46■■□□□ 1.03
EPHB4P54760 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.46■■□□□ 1.03
EPHB4P54760 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.46■■□□□ 1.03
EPHB4P54760 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
EPHB4P54760 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.46■■□□□ 1.03
EPHB4P54760 KRT8P17-201ENST00000453110 1448 ntBASIC21.46■■□□□ 1.03
EPHB4P54760 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.46■■□□□ 1.03
EPHB4P54760 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB4P54760 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
EPHB4P54760 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB4P54760 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB4P54760 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB4P54760 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
EPHB4P54760 HOMER2P1-201ENST00000455653 964 ntBASIC21.45■■□□□ 1.02
EPHB4P54760 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB4P54760 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB4P54760 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
EPHB4P54760 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 AL023803.3-201ENST00000615559 522 ntBASIC21.45■■□□□ 1.02
EPHB4P54760 AL023973.1-201ENST00000624619 620 ntBASIC21.45■■□□□ 1.02
EPHB4P54760 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB4P54760 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.45■■□□□ 1.02
EPHB4P54760 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB4P54760 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EPHB4P54760 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EPHB4P54760 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EPHB4P54760 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.44■■□□□ 1.02
EPHB4P54760 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.44■■□□□ 1.02
EPHB4P54760 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EPHB4P54760 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.44■■□□□ 1.02
EPHB4P54760 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.44■■□□□ 1.02
EPHB4P54760 AC004951.3-201ENST00000418645 1148 ntBASIC21.44■■□□□ 1.02
EPHB4P54760 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.44■■□□□ 1.02
EPHB4P54760 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
EPHB4P54760 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.44■■□□□ 1.02
EPHB4P54760 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.44■■□□□ 1.02
EPHB4P54760 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.44■■□□□ 1.02
EPHB4P54760 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EPHB4P54760 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
EPHB4P54760 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.43■■□□□ 1.02
EPHB4P54760 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.43■■□□□ 1.02
EPHB4P54760 AC246785.2-201ENST00000432512 513 ntBASIC21.43■■□□□ 1.02
EPHB4P54760 TUBB8P6-201ENST00000436895 1288 ntBASIC21.43■■□□□ 1.02
EPHB4P54760 YBX1P10-201ENST00000444752 975 ntBASIC21.43■■□□□ 1.02
EPHB4P54760 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.43■■□□□ 1.02
EPHB4P54760 AC069148.1-201ENST00000608741 768 ntBASIC21.43■■□□□ 1.02
EPHB4P54760 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
EPHB4P54760 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.43■■□□□ 1.02
EPHB4P54760 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 TFP1-202ENST00000475455 1573 ntBASIC21.43■■□□□ 1.02
EPHB4P54760 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EPHB4P54760 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.43■■□□□ 1.02
EPHB4P54760 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms