Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RAD23BP54727 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.43■□□□□ 0.86
RAD23BP54727 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.43■□□□□ 0.86
RAD23BP54727 AL355355.2-201ENST00000442321 338 ntBASIC20.43■□□□□ 0.86
RAD23BP54727 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.43■□□□□ 0.86
RAD23BP54727 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.43■□□□□ 0.86
RAD23BP54727 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.43■□□□□ 0.86
RAD23BP54727 AP003071.4-201ENST00000562276 1284 ntBASIC20.43■□□□□ 0.86
RAD23BP54727 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.43■□□□□ 0.86
RAD23BP54727 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.43■□□□□ 0.86
RAD23BP54727 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD23BP54727 FSCN1P1-201ENST00000568912 1481 ntBASIC20.43■□□□□ 0.86
RAD23BP54727 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAD23BP54727 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RAD23BP54727 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.42■□□□□ 0.86
RAD23BP54727 TSPY23P-201ENST00000440136 739 ntBASIC20.42■□□□□ 0.86
RAD23BP54727 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.42■□□□□ 0.86
RAD23BP54727 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.42■□□□□ 0.86
RAD23BP54727 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.42■□□□□ 0.86
RAD23BP54727 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.42■□□□□ 0.86
RAD23BP54727 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.42■□□□□ 0.86
RAD23BP54727 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.42■□□□□ 0.86
RAD23BP54727 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAD23BP54727 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.42■□□□□ 0.86
RAD23BP54727 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.42■□□□□ 0.86
RAD23BP54727 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.41■□□□□ 0.86
RAD23BP54727 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAD23BP54727 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAD23BP54727 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RAD23BP54727 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.41■□□□□ 0.86
RAD23BP54727 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.41■□□□□ 0.86
RAD23BP54727 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.41■□□□□ 0.86
RAD23BP54727 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 MIR4785-201ENST00000585005 73 ntBASIC20.41■□□□□ 0.86
RAD23BP54727 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.41■□□□□ 0.86
RAD23BP54727 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.41■□□□□ 0.86
RAD23BP54727 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.41■□□□□ 0.86
RAD23BP54727 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.41■□□□□ 0.86
RAD23BP54727 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.41■□□□□ 0.86
RAD23BP54727 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RAD23BP54727 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAD23BP54727 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RAD23BP54727 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.4■□□□□ 0.86
RAD23BP54727 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RAD23BP54727 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.4■□□□□ 0.86
RAD23BP54727 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.4■□□□□ 0.86
RAD23BP54727 KRT8P11-201ENST00000409686 1436 ntBASIC20.4■□□□□ 0.86
RAD23BP54727 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.4■□□□□ 0.86
RAD23BP54727 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.4■□□□□ 0.86
RAD23BP54727 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAD23BP54727 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.4■□□□□ 0.86
RAD23BP54727 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms