Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.08■□□□□ 0.97
ACLYP53396 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.08■□□□□ 0.97
ACLYP53396 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACLYP53396 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ACLYP53396 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.08■□□□□ 0.97
ACLYP53396 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.08■□□□□ 0.97
ACLYP53396 ZNF815P-204ENST00000434898 1737 ntBASIC21.08■□□□□ 0.97
ACLYP53396 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ACLYP53396 SEC1P-202ENST00000473944 940 ntBASIC21.08■□□□□ 0.97
ACLYP53396 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.08■□□□□ 0.97
ACLYP53396 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.08■□□□□ 0.97
ACLYP53396 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ACLYP53396 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.08■□□□□ 0.97
ACLYP53396 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ACLYP53396 AC093525.10-201ENST00000625130 1569 ntBASIC21.08■□□□□ 0.97
ACLYP53396 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.08■□□□□ 0.97
ACLYP53396 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.08■□□□□ 0.96
ACLYP53396 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.08■□□□□ 0.96
ACLYP53396 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.08■□□□□ 0.96
ACLYP53396 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.08■□□□□ 0.96
ACLYP53396 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ACLYP53396 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ACLYP53396 AL391422.3-201ENST00000603791 2761 ntBASIC21.08■□□□□ 0.96
ACLYP53396 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ACLYP53396 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ACLYP53396 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ACLYP53396 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACLYP53396 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ACLYP53396 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ACLYP53396 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.07■□□□□ 0.96
ACLYP53396 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACLYP53396 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACLYP53396 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.07■□□□□ 0.96
ACLYP53396 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
ACLYP53396 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ACLYP53396 CHCHD2P8-201ENST00000429873 447 ntBASIC21.07■□□□□ 0.96
ACLYP53396 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.07■□□□□ 0.96
ACLYP53396 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.07■□□□□ 0.96
ACLYP53396 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.07■□□□□ 0.96
ACLYP53396 IFNL4P1-201ENST00000607083 540 ntBASIC21.07■□□□□ 0.96
ACLYP53396 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACLYP53396 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.07■□□□□ 0.96
ACLYP53396 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.07■□□□□ 0.96
ACLYP53396 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACLYP53396 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
ACLYP53396 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ACLYP53396 AL162377.1-201ENST00000618844 1793 ntBASIC21.06■□□□□ 0.96
ACLYP53396 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
ACLYP53396 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.06■□□□□ 0.96
ACLYP53396 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ACLYP53396 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 HLA-F-220ENST00000434407 884 ntBASIC21.06■□□□□ 0.96
ACLYP53396 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.06■□□□□ 0.96
ACLYP53396 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ACLYP53396 MIR3180-5-201ENST00000583743 153 ntBASIC21.06■□□□□ 0.96
ACLYP53396 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ACLYP53396 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ACLYP53396 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACLYP53396 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ACLYP53396 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.06■□□□□ 0.96
ACLYP53396 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ACLYP53396 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.05■□□□□ 0.96
ACLYP53396 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ACLYP53396 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.05■□□□□ 0.96
ACLYP53396 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.05■□□□□ 0.96
ACLYP53396 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.05■□□□□ 0.96
ACLYP53396 AL157888.1-201ENST00000631930 593 ntBASIC21.05■□□□□ 0.96
ACLYP53396 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ACLYP53396 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ACLYP53396 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 KRT18P1-202ENST00000452408 1331 ntBASIC21.04■□□□□ 0.96
ACLYP53396 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.04■□□□□ 0.96
ACLYP53396 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.04■□□□□ 0.96
ACLYP53396 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.04■□□□□ 0.96
ACLYP53396 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.04■□□□□ 0.96
ACLYP53396 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms