Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 KRT18P16-201ENST00000510337 1294 ntBASIC18.29■□□□□ 0.52
POLR2JP52435 AC091874.3-201ENST00000512672 1195 ntBASIC18.29■□□□□ 0.52
POLR2JP52435 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
POLR2JP52435 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.29■□□□□ 0.52
POLR2JP52435 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR2JP52435 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR2JP52435 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
POLR2JP52435 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR2JP52435 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
POLR2JP52435 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
POLR2JP52435 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR2JP52435 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR2JP52435 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR2JP52435 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR2JP52435 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR2JP52435 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR2JP52435 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR2JP52435 AC092118.2-201ENST00000613495 667 ntBASIC18.28■□□□□ 0.52
POLR2JP52435 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR2JP52435 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
POLR2JP52435 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
POLR2JP52435 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR2JP52435 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
POLR2JP52435 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
POLR2JP52435 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2JP52435 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2JP52435 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR2JP52435 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2JP52435 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2JP52435 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2JP52435 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
POLR2JP52435 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR2JP52435 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR2JP52435 TUBB8P6-201ENST00000436895 1288 ntBASIC18.27■□□□□ 0.52
POLR2JP52435 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.27■□□□□ 0.52
POLR2JP52435 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR2JP52435 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR2JP52435 BICD1-207ENST00000551848 1962 ntBASIC18.27■□□□□ 0.52
POLR2JP52435 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
POLR2JP52435 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
POLR2JP52435 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.27■□□□□ 0.51
POLR2JP52435 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2JP52435 LETM1P2-201ENST00000597330 2178 ntBASIC18.27■□□□□ 0.51
POLR2JP52435 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2JP52435 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2JP52435 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
POLR2JP52435 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 AC092368.3-202ENST00000574180 1591 ntBASIC18.26■□□□□ 0.51
POLR2JP52435 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
POLR2JP52435 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR2JP52435 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
POLR2JP52435 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR2JP52435 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
POLR2JP52435 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.26■□□□□ 0.51
POLR2JP52435 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.26■□□□□ 0.51
POLR2JP52435 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR2JP52435 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2JP52435 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
POLR2JP52435 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2JP52435 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
POLR2JP52435 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
POLR2JP52435 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
POLR2JP52435 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR2JP52435 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2JP52435 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR2JP52435 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2JP52435 HCG11-201ENST00000411553 5696 ntBASIC18.25■□□□□ 0.51
POLR2JP52435 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2JP52435 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR2JP52435 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms