Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 AC098934.4-201ENST00000564127 592 ntBASIC17.31■□□□□ 0.36
CENPAP49450 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.31■□□□□ 0.36
CENPAP49450 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.31■□□□□ 0.36
CENPAP49450 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CENPAP49450 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.3■□□□□ 0.36
CENPAP49450 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.3■□□□□ 0.36
CENPAP49450 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.3■□□□□ 0.36
CENPAP49450 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 AL020996.1-203ENST00000536896 2307 ntBASIC17.3■□□□□ 0.36
CENPAP49450 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CENPAP49450 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.3■□□□□ 0.36
CENPAP49450 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.3■□□□□ 0.36
CENPAP49450 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.3■□□□□ 0.36
CENPAP49450 PNMA6B-201ENST00000538162 1200 ntBASIC17.3■□□□□ 0.36
CENPAP49450 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.3■□□□□ 0.36
CENPAP49450 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.3■□□□□ 0.36
CENPAP49450 HLA-B-256ENST00000639848 1089 ntBASIC17.3■□□□□ 0.36
CENPAP49450 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CENPAP49450 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CENPAP49450 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 AP006587.1-201ENST00000534129 1502 ntBASIC17.3■□□□□ 0.36
CENPAP49450 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CENPAP49450 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CENPAP49450 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.3■□□□□ 0.36
CENPAP49450 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CENPAP49450 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CENPAP49450 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
CENPAP49450 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.29■□□□□ 0.36
CENPAP49450 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.29■□□□□ 0.36
CENPAP49450 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CENPAP49450 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.29■□□□□ 0.36
CENPAP49450 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.29■□□□□ 0.36
CENPAP49450 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPAP49450 AC060766.5-201ENST00000590539 871 ntBASIC17.29■□□□□ 0.36
CENPAP49450 AL121906.2-201ENST00000621597 723 ntBASIC17.29■□□□□ 0.36
CENPAP49450 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPAP49450 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CENPAP49450 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CENPAP49450 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CENPAP49450 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CENPAP49450 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CENPAP49450 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPAP49450 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.28■□□□□ 0.36
CENPAP49450 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CENPAP49450 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.28■□□□□ 0.36
CENPAP49450 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.28■□□□□ 0.36
CENPAP49450 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.28■□□□□ 0.36
CENPAP49450 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms