Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.29■□□□□ 0.84
SSR1P43307 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.29■□□□□ 0.84
SSR1P43307 UNC93B5-201ENST00000530315 699 ntBASIC20.29■□□□□ 0.84
SSR1P43307 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.29■□□□□ 0.84
SSR1P43307 PRKY-204ENST00000533551 1019 ntBASIC20.29■□□□□ 0.84
SSR1P43307 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.29■□□□□ 0.84
SSR1P43307 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
SSR1P43307 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SSR1P43307 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SSR1P43307 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.29■□□□□ 0.84
SSR1P43307 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.29■□□□□ 0.84
SSR1P43307 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SSR1P43307 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR1P43307 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SSR1P43307 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SSR1P43307 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SSR1P43307 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SSR1P43307 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.28■□□□□ 0.84
SSR1P43307 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 POM121L13P-201ENST00000422362 380 ntBASIC20.28■□□□□ 0.84
SSR1P43307 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.28■□□□□ 0.84
SSR1P43307 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.28■□□□□ 0.84
SSR1P43307 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
SSR1P43307 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SSR1P43307 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.28■□□□□ 0.84
SSR1P43307 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SSR1P43307 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR1P43307 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SSR1P43307 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SSR1P43307 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SSR1P43307 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR1P43307 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SSR1P43307 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR1P43307 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SSR1P43307 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SSR1P43307 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.27■□□□□ 0.84
SSR1P43307 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.27■□□□□ 0.84
SSR1P43307 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.27■□□□□ 0.84
SSR1P43307 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.27■□□□□ 0.84
SSR1P43307 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR1P43307 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR1P43307 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
SSR1P43307 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
SSR1P43307 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSR1P43307 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SSR1P43307 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSR1P43307 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SSR1P43307 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.27■□□□□ 0.83
SSR1P43307 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSR1P43307 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
SSR1P43307 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.26■□□□□ 0.83
SSR1P43307 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms