Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKN2CP42773 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKN2CP42773 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CDKN2CP42773 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 AC005082.1-201ENST00000413042 2259 ntBASIC18.08■□□□□ 0.48
CDKN2CP42773 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKN2CP42773 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKN2CP42773 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDKN2CP42773 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDKN2CP42773 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDKN2CP42773 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2CP42773 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDKN2CP42773 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2CP42773 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2CP42773 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2CP42773 AIRN-201ENST00000601203 4374 ntBASIC18.07■□□□□ 0.48
CDKN2CP42773 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDKN2CP42773 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2CP42773 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2CP42773 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDKN2CP42773 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2CP42773 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2CP42773 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDKN2CP42773 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDKN2CP42773 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2CP42773 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2CP42773 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKN2CP42773 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2CP42773 UNC93B4-201ENST00000505679 747 ntBASIC18.06■□□□□ 0.48
CDKN2CP42773 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2CP42773 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKN2CP42773 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.06■□□□□ 0.48
CDKN2CP42773 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.06■□□□□ 0.48
CDKN2CP42773 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 AC133041.1-202ENST00000642053 222 ntBASIC18.06■□□□□ 0.48
CDKN2CP42773 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2CP42773 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2CP42773 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2CP42773 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2CP42773 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 AC090164.3-201ENST00000610780 2143 ntBASIC18.05■□□□□ 0.48
CDKN2CP42773 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN2CP42773 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDKN2CP42773 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKN2CP42773 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKN2CP42773 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKN2CP42773 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKN2CP42773 AC104771.1-201ENST00000603335 964 ntBASIC18.05■□□□□ 0.48
CDKN2CP42773 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN2CP42773 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms