Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SCNN1AP37088 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.91■□□□□ 0.78
SCNN1AP37088 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SCNN1AP37088 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SCNN1AP37088 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 RBM17P1-201ENST00000453646 1190 ntBASIC19.91■□□□□ 0.78
SCNN1AP37088 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.91■□□□□ 0.78
SCNN1AP37088 AC066615.1-201ENST00000640911 628 ntBASIC19.91■□□□□ 0.78
SCNN1AP37088 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SCNN1AP37088 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCNN1AP37088 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SCNN1AP37088 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.9■□□□□ 0.78
SCNN1AP37088 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 AL049812.1-201ENST00000432563 2267 ntBASIC19.9■□□□□ 0.78
SCNN1AP37088 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.9■□□□□ 0.78
SCNN1AP37088 UNC93B2-201ENST00000285383 730 ntBASIC19.9■□□□□ 0.78
SCNN1AP37088 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.9■□□□□ 0.78
SCNN1AP37088 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.9■□□□□ 0.78
SCNN1AP37088 MFAP1P1-201ENST00000442257 1255 ntBASIC19.9■□□□□ 0.78
SCNN1AP37088 CA15P1-201ENST00000481698 905 ntBASIC19.9■□□□□ 0.78
SCNN1AP37088 AC097488.1-201ENST00000507834 756 ntBASIC19.9■□□□□ 0.78
SCNN1AP37088 AC093827.2-201ENST00000512654 315 ntBASIC19.9■□□□□ 0.78
SCNN1AP37088 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.9■□□□□ 0.78
SCNN1AP37088 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.9■□□□□ 0.78
SCNN1AP37088 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCNN1AP37088 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SCNN1AP37088 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.78
SCNN1AP37088 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.89■□□□□ 0.77
SCNN1AP37088 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SCNN1AP37088 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SCNN1AP37088 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.89■□□□□ 0.77
SCNN1AP37088 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.89■□□□□ 0.77
SCNN1AP37088 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SCNN1AP37088 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.89■□□□□ 0.77
SCNN1AP37088 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.89■□□□□ 0.77
SCNN1AP37088 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SCNN1AP37088 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCNN1AP37088 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.89■□□□□ 0.77
SCNN1AP37088 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.89■□□□□ 0.77
SCNN1AP37088 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.88■□□□□ 0.77
SCNN1AP37088 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.88■□□□□ 0.77
SCNN1AP37088 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.88■□□□□ 0.77
SCNN1AP37088 SLC25A1P4-201ENST00000567977 778 ntBASIC19.88■□□□□ 0.77
SCNN1AP37088 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 AC083906.6-201ENST00000641366 219 ntBASIC19.88■□□□□ 0.77
SCNN1AP37088 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms