Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CTGFP29279 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CTGFP29279 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.59■■□□□ 1.05
CTGFP29279 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.59■■□□□ 1.05
CTGFP29279 AL662844.1-201ENST00000546340 181 ntBASIC21.59■■□□□ 1.05
CTGFP29279 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.59■■□□□ 1.05
CTGFP29279 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.59■■□□□ 1.05
CTGFP29279 MIR3917-201ENST00000580971 93 ntBASIC21.59■■□□□ 1.05
CTGFP29279 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.59■■□□□ 1.05
CTGFP29279 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 AC138894.3-201ENST00000603787 634 ntBASIC21.59■■□□□ 1.05
CTGFP29279 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.59■■□□□ 1.05
CTGFP29279 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.59■■□□□ 1.05
CTGFP29279 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CTGFP29279 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.59■■□□□ 1.05
CTGFP29279 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTGFP29279 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTGFP29279 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.58■■□□□ 1.05
CTGFP29279 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTGFP29279 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTGFP29279 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTGFP29279 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.58■■□□□ 1.05
CTGFP29279 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.58■■□□□ 1.05
CTGFP29279 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.58■■□□□ 1.05
CTGFP29279 BX640515.1-201ENST00000617215 977 ntBASIC21.58■■□□□ 1.05
CTGFP29279 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTGFP29279 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
CTGFP29279 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.58■■□□□ 1.04
CTGFP29279 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.58■■□□□ 1.04
CTGFP29279 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CTGFP29279 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.57■■□□□ 1.04
CTGFP29279 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.57■■□□□ 1.04
CTGFP29279 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.57■■□□□ 1.04
CTGFP29279 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.57■■□□□ 1.04
CTGFP29279 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.57■■□□□ 1.04
CTGFP29279 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.57■■□□□ 1.04
CTGFP29279 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.57■■□□□ 1.04
CTGFP29279 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.57■■□□□ 1.04
CTGFP29279 MIR3180-5-201ENST00000583743 153 ntBASIC21.57■■□□□ 1.04
CTGFP29279 AL353801.3-201ENST00000609898 542 ntBASIC21.57■■□□□ 1.04
CTGFP29279 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CTGFP29279 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.57■■□□□ 1.04
CTGFP29279 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.57■■□□□ 1.04
CTGFP29279 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.57■■□□□ 1.04
CTGFP29279 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTGFP29279 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CTGFP29279 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.56■■□□□ 1.04
CTGFP29279 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.56■■□□□ 1.04
CTGFP29279 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTGFP29279 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTGFP29279 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CTGFP29279 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CTGFP29279 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.56■■□□□ 1.04
CTGFP29279 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CTGFP29279 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.56■■□□□ 1.04
CTGFP29279 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTGFP29279 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.56■■□□□ 1.04
CTGFP29279 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.56■■□□□ 1.04
CTGFP29279 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTGFP29279 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTGFP29279 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.56■■□□□ 1.04
CTGFP29279 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CTGFP29279 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.56■■□□□ 1.04
CTGFP29279 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.56■■□□□ 1.04
CTGFP29279 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.55■■□□□ 1.04
CTGFP29279 Z83836.1-201ENST00000624605 1642 ntBASIC21.55■■□□□ 1.04
CTGFP29279 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CTGFP29279 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CTGFP29279 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.55■■□□□ 1.04
CTGFP29279 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.55■■□□□ 1.04
CTGFP29279 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTGFP29279 RNA5SP419-201ENST00000515908 135 ntBASIC21.55■■□□□ 1.04
CTGFP29279 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CTGFP29279 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms