Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.49■□□□□ 0.87
BRD2P25440 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.49■□□□□ 0.87
BRD2P25440 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.49■□□□□ 0.87
BRD2P25440 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
BRD2P25440 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.49■□□□□ 0.87
BRD2P25440 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.49■□□□□ 0.87
BRD2P25440 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.49■□□□□ 0.87
BRD2P25440 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.49■□□□□ 0.87
BRD2P25440 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.49■□□□□ 0.87
BRD2P25440 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.49■□□□□ 0.87
BRD2P25440 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BRD2P25440 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.49■□□□□ 0.87
BRD2P25440 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
BRD2P25440 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
BRD2P25440 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD2P25440 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
BRD2P25440 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.48■□□□□ 0.87
BRD2P25440 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.48■□□□□ 0.87
BRD2P25440 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.48■□□□□ 0.87
BRD2P25440 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
BRD2P25440 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
BRD2P25440 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.48■□□□□ 0.87
BRD2P25440 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.48■□□□□ 0.87
BRD2P25440 CR392000.1-201ENST00000624770 1228 ntBASIC20.48■□□□□ 0.87
BRD2P25440 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.48■□□□□ 0.87
BRD2P25440 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.48■□□□□ 0.87
BRD2P25440 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.48■□□□□ 0.87
BRD2P25440 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD2P25440 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.47■□□□□ 0.87
BRD2P25440 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 AC004980.1-204ENST00000429707 299 ntBASIC20.47■□□□□ 0.87
BRD2P25440 KSR1P1-201ENST00000446298 240 ntBASIC20.47■□□□□ 0.87
BRD2P25440 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD2P25440 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 Z85996.1-201ENST00000494644 937 ntBASIC20.47■□□□□ 0.87
BRD2P25440 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.47■□□□□ 0.87
BRD2P25440 AC073195.1-201ENST00000607241 877 ntBASIC20.47■□□□□ 0.87
BRD2P25440 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.47■□□□□ 0.87
BRD2P25440 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD2P25440 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD2P25440 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD2P25440 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD2P25440 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
BRD2P25440 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD2P25440 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRD2P25440 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRD2P25440 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD2P25440 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRD2P25440 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.46■□□□□ 0.87
BRD2P25440 RPS2P55-201ENST00000397318 883 ntBASIC20.46■□□□□ 0.87
BRD2P25440 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.46■□□□□ 0.87
BRD2P25440 FAM197Y1-201ENST00000421178 764 ntBASIC20.46■□□□□ 0.87
BRD2P25440 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.46■□□□□ 0.87
BRD2P25440 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
BRD2P25440 AC107956.1-201ENST00000494359 873 ntBASIC20.46■□□□□ 0.87
BRD2P25440 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.46■□□□□ 0.87
BRD2P25440 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.46■□□□□ 0.87
BRD2P25440 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.46■□□□□ 0.87
BRD2P25440 Z99916.2-201ENST00000604037 246 ntBASIC20.46■□□□□ 0.87
BRD2P25440 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD2P25440 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD2P25440 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
BRD2P25440 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms