Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPB42P16452 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPB42P16452 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPB42P16452 IRX1P1-201ENST00000438849 1838 ntBASIC18.63■□□□□ 0.57
EPB42P16452 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EPB42P16452 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
EPB42P16452 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 KRASP1-201ENST00000407852 552 ntBASIC18.62■□□□□ 0.57
EPB42P16452 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
EPB42P16452 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.62■□□□□ 0.57
EPB42P16452 AL160286.2-201ENST00000567150 934 ntBASIC18.62■□□□□ 0.57
EPB42P16452 HLA-A-209ENST00000638375 975 ntBASIC18.62■□□□□ 0.57
EPB42P16452 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
EPB42P16452 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.62■□□□□ 0.57
EPB42P16452 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.62■□□□□ 0.57
EPB42P16452 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.62■□□□□ 0.57
EPB42P16452 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
EPB42P16452 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EPB42P16452 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
EPB42P16452 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPB42P16452 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EPB42P16452 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
EPB42P16452 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
EPB42P16452 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB42P16452 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 KRT16P5-201ENST00000455284 522 ntBASIC18.61■□□□□ 0.57
EPB42P16452 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.61■□□□□ 0.57
EPB42P16452 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.61■□□□□ 0.57
EPB42P16452 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
EPB42P16452 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.61■□□□□ 0.57
EPB42P16452 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB42P16452 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EPB42P16452 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.61■□□□□ 0.57
EPB42P16452 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPB42P16452 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EPB42P16452 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPB42P16452 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.61■□□□□ 0.57
EPB42P16452 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPB42P16452 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EPB42P16452 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
EPB42P16452 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EPB42P16452 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.6■□□□□ 0.57
EPB42P16452 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
EPB42P16452 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EPB42P16452 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.6■□□□□ 0.57
EPB42P16452 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.6■□□□□ 0.57
EPB42P16452 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.6■□□□□ 0.57
EPB42P16452 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.6■□□□□ 0.57
EPB42P16452 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.6■□□□□ 0.57
EPB42P16452 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 AC006333.2-201ENST00000607957 2099 ntBASIC18.6■□□□□ 0.57
EPB42P16452 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.6■□□□□ 0.57
EPB42P16452 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.6■□□□□ 0.57
EPB42P16452 FEM1AP3-201ENST00000403722 1741 ntBASIC18.6■□□□□ 0.57
EPB42P16452 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPB42P16452 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB42P16452 AC020763.4-201ENST00000623414 4170 ntBASIC18.59■□□□□ 0.57
EPB42P16452 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
EPB42P16452 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPB42P16452 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB42P16452 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB42P16452 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPB42P16452 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPB42P16452 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.59■□□□□ 0.57
EPB42P16452 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.59■□□□□ 0.57
EPB42P16452 AC006058.3-201ENST00000606217 1069 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms