Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ITGA4P13612 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA4P13612 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA4P13612 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ITGA4P13612 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA4P13612 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA4P13612 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA4P13612 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ITGA4P13612 TREX1-205ENST00000625293 1783 ntBASIC20.97■□□□□ 0.95
ITGA4P13612 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA4P13612 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA4P13612 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.96■□□□□ 0.95
ITGA4P13612 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.96■□□□□ 0.95
ITGA4P13612 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.96■□□□□ 0.95
ITGA4P13612 AC005332.7-201ENST00000614046 2005 ntBASIC20.96■□□□□ 0.95
ITGA4P13612 BX323043.1-201ENST00000641006 1765 ntBASIC20.96■□□□□ 0.95
ITGA4P13612 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 INGX-201ENST00000359239 846 ntBASIC20.96■□□□□ 0.95
ITGA4P13612 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 LIN28AP1-201ENST00000429574 405 ntBASIC20.96■□□□□ 0.95
ITGA4P13612 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
ITGA4P13612 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.96■□□□□ 0.95
ITGA4P13612 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.96■□□□□ 0.95
ITGA4P13612 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA4P13612 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA4P13612 AC073508.3-201ENST00000619697 1419 ntBASIC20.95■□□□□ 0.95
ITGA4P13612 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 AC093484.2-201ENST00000580996 2166 ntBASIC20.95■□□□□ 0.94
ITGA4P13612 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
ITGA4P13612 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA4P13612 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
ITGA4P13612 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.95■□□□□ 0.94
ITGA4P13612 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA4P13612 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.95■□□□□ 0.94
ITGA4P13612 AC010203.1-204ENST00000548782 407 ntBASIC20.95■□□□□ 0.94
ITGA4P13612 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.95■□□□□ 0.94
ITGA4P13612 AL049597.2-201ENST00000565575 961 ntBASIC20.95■□□□□ 0.94
ITGA4P13612 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
ITGA4P13612 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA4P13612 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA4P13612 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA4P13612 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.94■□□□□ 0.94
ITGA4P13612 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.94■□□□□ 0.94
ITGA4P13612 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
ITGA4P13612 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.94■□□□□ 0.94
ITGA4P13612 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.94■□□□□ 0.94
ITGA4P13612 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 CCR12P-201ENST00000446203 998 ntBASIC20.94■□□□□ 0.94
ITGA4P13612 ATP5G1P1-201ENST00000448724 379 ntBASIC20.94■□□□□ 0.94
ITGA4P13612 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.94■□□□□ 0.94
ITGA4P13612 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.94■□□□□ 0.94
ITGA4P13612 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.94■□□□□ 0.94
ITGA4P13612 AC116562.4-202ENST00000641738 218 ntBASIC20.94■□□□□ 0.94
ITGA4P13612 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.94■□□□□ 0.94
ITGA4P13612 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.94■□□□□ 0.94
ITGA4P13612 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ITGA4P13612 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ITGA4P13612 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.94■□□□□ 0.94
ITGA4P13612 KRT8P41-201ENST00000533985 1514 ntBASIC20.94■□□□□ 0.94
ITGA4P13612 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.93■□□□□ 0.94
ITGA4P13612 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.93■□□□□ 0.94
ITGA4P13612 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITGA4P13612 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITGA4P13612 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms