Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 AL031598.1-201ENST00000561511 1773 ntBASIC18.12■□□□□ 0.49
LAMP1P11279 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LAMP1P11279 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LAMP1P11279 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.12■□□□□ 0.49
LAMP1P11279 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.12■□□□□ 0.49
LAMP1P11279 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LAMP1P11279 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.12■□□□□ 0.49
LAMP1P11279 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 C1QL1P1-201ENST00000568105 661 ntBASIC18.12■□□□□ 0.49
LAMP1P11279 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
LAMP1P11279 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LAMP1P11279 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.12■□□□□ 0.49
LAMP1P11279 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LAMP1P11279 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.12■□□□□ 0.49
LAMP1P11279 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
LAMP1P11279 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.11■□□□□ 0.49
LAMP1P11279 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LAMP1P11279 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LAMP1P11279 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LAMP1P11279 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.11■□□□□ 0.49
LAMP1P11279 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 KRT17P3-201ENST00000420566 1262 ntBASIC18.11■□□□□ 0.49
LAMP1P11279 AC026366.1-201ENST00000488803 879 ntBASIC18.11■□□□□ 0.49
LAMP1P11279 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.11■□□□□ 0.49
LAMP1P11279 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 AL160286.2-201ENST00000567150 934 ntBASIC18.11■□□□□ 0.49
LAMP1P11279 AC004264.1-201ENST00000608354 794 ntBASIC18.11■□□□□ 0.49
LAMP1P11279 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.11■□□□□ 0.49
LAMP1P11279 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.11■□□□□ 0.49
LAMP1P11279 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.11■□□□□ 0.49
LAMP1P11279 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LAMP1P11279 AC104581.1-202ENST00000635932 2618 ntBASIC18.11■□□□□ 0.49
LAMP1P11279 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LAMP1P11279 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LAMP1P11279 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.1■□□□□ 0.49
LAMP1P11279 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.1■□□□□ 0.49
LAMP1P11279 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.1■□□□□ 0.49
LAMP1P11279 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.1■□□□□ 0.49
LAMP1P11279 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.1■□□□□ 0.49
LAMP1P11279 AC093525.10-201ENST00000625130 1569 ntBASIC18.1■□□□□ 0.49
LAMP1P11279 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.1■□□□□ 0.49
LAMP1P11279 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.1■□□□□ 0.49
LAMP1P11279 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.1■□□□□ 0.49
LAMP1P11279 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.1■□□□□ 0.49
LAMP1P11279 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.1■□□□□ 0.49
LAMP1P11279 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.1■□□□□ 0.49
LAMP1P11279 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 AL512353.2-201ENST00000448759 1962 ntBASIC18.1■□□□□ 0.49
LAMP1P11279 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LAMP1P11279 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LAMP1P11279 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LAMP1P11279 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
LAMP1P11279 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LAMP1P11279 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms