Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VTNP04004 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTNP04004 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTNP04004 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.98■□□□□ 0.95
VTNP04004 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
VTNP04004 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VTNP04004 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.98■□□□□ 0.95
VTNP04004 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.98■□□□□ 0.95
VTNP04004 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
VTNP04004 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.98■□□□□ 0.95
VTNP04004 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.98■□□□□ 0.95
VTNP04004 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.98■□□□□ 0.95
VTNP04004 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTNP04004 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.98■□□□□ 0.95
VTNP04004 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.97■□□□□ 0.95
VTNP04004 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 FAM8A6P-201ENST00000407496 1135 ntBASIC20.97■□□□□ 0.95
VTNP04004 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.97■□□□□ 0.95
VTNP04004 AL441883.1-201ENST00000566170 1045 ntBASIC20.97■□□□□ 0.95
VTNP04004 LINC01238-205ENST00000567549 1107 ntBASIC20.97■□□□□ 0.95
VTNP04004 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.97■□□□□ 0.95
VTNP04004 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
VTNP04004 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.97■□□□□ 0.95
VTNP04004 AC008622.2-201ENST00000617006 1229 ntBASIC20.97■□□□□ 0.95
VTNP04004 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
VTNP04004 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VTNP04004 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
VTNP04004 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
VTNP04004 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.96■□□□□ 0.95
VTNP04004 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.96■□□□□ 0.95
VTNP04004 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 AC092647.4-201ENST00000457211 535 ntBASIC20.96■□□□□ 0.95
VTNP04004 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.96■□□□□ 0.95
VTNP04004 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.96■□□□□ 0.95
VTNP04004 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.96■□□□□ 0.95
VTNP04004 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VTNP04004 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.96■□□□□ 0.95
VTNP04004 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.96■□□□□ 0.95
VTNP04004 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
VTNP04004 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
VTNP04004 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.95■□□□□ 0.94
VTNP04004 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VTNP04004 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
VTNP04004 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.95■□□□□ 0.94
VTNP04004 AC009947.2-201ENST00000444014 672 ntBASIC20.95■□□□□ 0.94
VTNP04004 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.95■□□□□ 0.94
VTNP04004 AC140113.3-201ENST00000605663 199 ntBASIC20.95■□□□□ 0.94
VTNP04004 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
VTNP04004 MYC-208ENST00000641036 567 ntBASIC20.95■□□□□ 0.94
VTNP04004 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.95■□□□□ 0.94
VTNP04004 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
VTNP04004 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VTNP04004 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.95■□□□□ 0.94
VTNP04004 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VTNP04004 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.94■□□□□ 0.94
VTNP04004 Z82202.1-201ENST00000623446 1880 ntBASIC20.94■□□□□ 0.94
VTNP04004 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.94■□□□□ 0.94
VTNP04004 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.94■□□□□ 0.94
VTNP04004 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.94■□□□□ 0.94
VTNP04004 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.94■□□□□ 0.94
VTNP04004 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.94■□□□□ 0.94
VTNP04004 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VTNP04004 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms