Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AC067852.2-201ENST00000590513 2313 ntBASIC16.14■□□□□ 0.18
HLA-AP01891 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-AP01891 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
HLA-AP01891 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-AP01891 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-AP01891 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-AP01891 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-AP01891 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-AP01891 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-AP01891 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 CYP21A1P-202ENST00000354927 1481 ntBASIC16.14■□□□□ 0.17
HLA-AP01891 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HLA-AP01891 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-AP01891 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-AP01891 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-AP01891 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-AP01891 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 HLA-G-202ENST00000376815 851 ntBASIC16.13■□□□□ 0.17
HLA-AP01891 HLA-G-203ENST00000376818 1127 ntBASIC16.13■□□□□ 0.17
HLA-AP01891 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.13■□□□□ 0.17
HLA-AP01891 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-AP01891 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-AP01891 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-AP01891 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-AP01891 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
HLA-AP01891 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-AP01891 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-AP01891 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-AP01891 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-AP01891 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-AP01891 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-AP01891 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-AP01891 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HLA-AP01891 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-AP01891 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-AP01891 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HLA-AP01891 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.12■□□□□ 0.17
HLA-AP01891 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-AP01891 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-AP01891 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-AP01891 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HLA-AP01891 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-AP01891 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-AP01891 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HLA-AP01891 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-AP01891 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HLA-AP01891 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-AP01891 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-AP01891 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-AP01891 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-AP01891 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-AP01891 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-AP01891 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-AP01891 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms