Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP1P01033 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.7■□□□□ 0.9
TIMP1P01033 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TIMP1P01033 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.7■□□□□ 0.9
TIMP1P01033 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.69■□□□□ 0.9
TIMP1P01033 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.69■□□□□ 0.9
TIMP1P01033 AC026310.3-201ENST00000625186 2373 ntBASIC20.69■□□□□ 0.9
TIMP1P01033 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.69■□□□□ 0.9
TIMP1P01033 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TIMP1P01033 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP1P01033 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TIMP1P01033 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.68■□□□□ 0.9
TIMP1P01033 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TIMP1P01033 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TIMP1P01033 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.68■□□□□ 0.9
TIMP1P01033 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.68■□□□□ 0.9
TIMP1P01033 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.68■□□□□ 0.9
TIMP1P01033 AC104819.1-201ENST00000504587 486 ntBASIC20.68■□□□□ 0.9
TIMP1P01033 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.68■□□□□ 0.9
TIMP1P01033 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TIMP1P01033 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.68■□□□□ 0.9
TIMP1P01033 AL691432.2-201ENST00000607222 2038 ntBASIC20.68■□□□□ 0.9
TIMP1P01033 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TIMP1P01033 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP1P01033 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
TIMP1P01033 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 AP005212.1-201ENST00000581547 1997 ntBASIC20.67■□□□□ 0.9
TIMP1P01033 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.67■□□□□ 0.9
TIMP1P01033 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.67■□□□□ 0.9
TIMP1P01033 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.67■□□□□ 0.9
TIMP1P01033 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP1P01033 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP1P01033 KRT16P4-201ENST00000453883 522 ntBASIC20.67■□□□□ 0.9
TIMP1P01033 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.67■□□□□ 0.9
TIMP1P01033 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP1P01033 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.67■□□□□ 0.9
TIMP1P01033 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
TIMP1P01033 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TIMP1P01033 AL671883.3-201ENST00000603274 991 ntBASIC20.67■□□□□ 0.9
TIMP1P01033 BX640515.1-201ENST00000617215 977 ntBASIC20.67■□□□□ 0.9
TIMP1P01033 HLA-A-201ENST00000376802 1334 ntBASIC20.67■□□□□ 0.9
TIMP1P01033 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP1P01033 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP1P01033 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.67■□□□□ 0.9
TIMP1P01033 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TIMP1P01033 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP1P01033 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TIMP1P01033 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.66■□□□□ 0.9
TIMP1P01033 AC090616.6-201ENST00000582640 721 ntBASIC20.66■□□□□ 0.9
TIMP1P01033 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP1P01033 AL353801.3-201ENST00000609898 542 ntBASIC20.66■□□□□ 0.9
TIMP1P01033 AC117500.6-201ENST00000624871 588 ntBASIC20.66■□□□□ 0.9
TIMP1P01033 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP1P01033 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TIMP1P01033 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TIMP1P01033 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP1P01033 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP1P01033 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms