Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.33■□□□□ 0.85
LCA5LO95447 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.33■□□□□ 0.85
LCA5LO95447 SLC29A4P1-201ENST00000398760 971 ntBASIC20.33■□□□□ 0.85
LCA5LO95447 TSPY23P-201ENST00000440136 739 ntBASIC20.33■□□□□ 0.85
LCA5LO95447 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.33■□□□□ 0.85
LCA5LO95447 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.33■□□□□ 0.85
LCA5LO95447 AC008687.6-201ENST00000596318 630 ntBASIC20.33■□□□□ 0.85
LCA5LO95447 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
LCA5LO95447 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.33■□□□□ 0.84
LCA5LO95447 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LCA5LO95447 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LCA5LO95447 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 AC120498.9-201ENST00000339021 3867 ntBASIC20.32■□□□□ 0.84
LCA5LO95447 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.32■□□□□ 0.84
LCA5LO95447 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.32■□□□□ 0.84
LCA5LO95447 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LCA5LO95447 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.32■□□□□ 0.84
LCA5LO95447 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.32■□□□□ 0.84
LCA5LO95447 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.32■□□□□ 0.84
LCA5LO95447 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.32■□□□□ 0.84
LCA5LO95447 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.32■□□□□ 0.84
LCA5LO95447 AC006970.2-201ENST00000450065 779 ntBASIC20.32■□□□□ 0.84
LCA5LO95447 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.32■□□□□ 0.84
LCA5LO95447 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.32■□□□□ 0.84
LCA5LO95447 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.32■□□□□ 0.84
LCA5LO95447 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCA5LO95447 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.31■□□□□ 0.84
LCA5LO95447 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
LCA5LO95447 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LCA5LO95447 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LCA5LO95447 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.31■□□□□ 0.84
LCA5LO95447 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.31■□□□□ 0.84
LCA5LO95447 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.31■□□□□ 0.84
LCA5LO95447 SOX15-203ENST00000570788 1093 ntBASIC20.31■□□□□ 0.84
LCA5LO95447 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LCA5LO95447 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
LCA5LO95447 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LCA5LO95447 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.31■□□□□ 0.84
LCA5LO95447 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCA5LO95447 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.3■□□□□ 0.84
LCA5LO95447 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.3■□□□□ 0.84
LCA5LO95447 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
LCA5LO95447 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.3■□□□□ 0.84
LCA5LO95447 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LCA5LO95447 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 HLA-A-209ENST00000638375 975 ntBASIC20.3■□□□□ 0.84
LCA5LO95447 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.3■□□□□ 0.84
LCA5LO95447 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCA5LO95447 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.3■□□□□ 0.84
LCA5LO95447 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms