Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KLHL41O60662 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
KLHL41O60662 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL41O60662 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.95■□□□□ 0.62
KLHL41O60662 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL41O60662 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL41O60662 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KLHL41O60662 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL41O60662 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 RN7SL471P-201ENST00000580476 299 ntBASIC18.95■□□□□ 0.62
KLHL41O60662 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
KLHL41O60662 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.95■□□□□ 0.62
KLHL41O60662 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KLHL41O60662 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.95■□□□□ 0.62
KLHL41O60662 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KLHL41O60662 TEX21P-204ENST00000641479 1693 ntBASIC18.95■□□□□ 0.62
KLHL41O60662 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.95■□□□□ 0.62
KLHL41O60662 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KLHL41O60662 AC005332.8-201ENST00000622750 2735 ntBASIC18.94■□□□□ 0.62
KLHL41O60662 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.94■□□□□ 0.62
KLHL41O60662 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KLHL41O60662 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KLHL41O60662 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.94■□□□□ 0.62
KLHL41O60662 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
KLHL41O60662 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 RPPH1-201ENST00000516869 333 ntBASIC18.94■□□□□ 0.62
KLHL41O60662 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.94■□□□□ 0.62
KLHL41O60662 C1QBPP2-201ENST00000528754 825 ntBASIC18.94■□□□□ 0.62
KLHL41O60662 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.94■□□□□ 0.62
KLHL41O60662 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.94■□□□□ 0.62
KLHL41O60662 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.94■□□□□ 0.62
KLHL41O60662 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.94■□□□□ 0.62
KLHL41O60662 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KLHL41O60662 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
KLHL41O60662 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KLHL41O60662 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.93■□□□□ 0.62
KLHL41O60662 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KLHL41O60662 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.93■□□□□ 0.62
KLHL41O60662 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.93■□□□□ 0.62
KLHL41O60662 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 POM121L13P-201ENST00000422362 380 ntBASIC18.93■□□□□ 0.62
KLHL41O60662 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KLHL41O60662 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 C2orf69P4-201ENST00000565394 541 ntBASIC18.93■□□□□ 0.62
KLHL41O60662 SOX15-203ENST00000570788 1093 ntBASIC18.93■□□□□ 0.62
KLHL41O60662 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.93■□□□□ 0.62
KLHL41O60662 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 AC018470.1-201ENST00000624790 3129 ntBASIC18.93■□□□□ 0.62
KLHL41O60662 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
KLHL41O60662 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.93■□□□□ 0.62
KLHL41O60662 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KLHL41O60662 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KLHL41O60662 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL41O60662 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL41O60662 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KLHL41O60662 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KLHL41O60662 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.92■□□□□ 0.62
KLHL41O60662 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
KLHL41O60662 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms