Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 AC116562.4-201ENST00000641316 2276 ntBASIC17.22■□□□□ 0.35
ZIC3O60481 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ZIC3O60481 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.22■□□□□ 0.35
ZIC3O60481 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
ZIC3O60481 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.22■□□□□ 0.35
ZIC3O60481 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.22■□□□□ 0.35
ZIC3O60481 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.22■□□□□ 0.35
ZIC3O60481 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.22■□□□□ 0.35
ZIC3O60481 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.22■□□□□ 0.35
ZIC3O60481 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.22■□□□□ 0.35
ZIC3O60481 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ZIC3O60481 AC116562.4-202ENST00000641738 218 ntBASIC17.22■□□□□ 0.35
ZIC3O60481 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.22■□□□□ 0.35
ZIC3O60481 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZIC3O60481 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
ZIC3O60481 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.22■□□□□ 0.35
ZIC3O60481 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 AC092338.2-201ENST00000568827 1415 ntBASIC17.21■□□□□ 0.35
ZIC3O60481 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.21■□□□□ 0.35
ZIC3O60481 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.21■□□□□ 0.35
ZIC3O60481 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.21■□□□□ 0.35
ZIC3O60481 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.21■□□□□ 0.35
ZIC3O60481 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 CCR12P-201ENST00000446203 998 ntBASIC17.21■□□□□ 0.35
ZIC3O60481 TSPY17P-201ENST00000450329 467 ntBASIC17.21■□□□□ 0.35
ZIC3O60481 ECEL1P2-202ENST00000465689 757 ntBASIC17.21■□□□□ 0.35
ZIC3O60481 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 AL353719.1-201ENST00000566847 864 ntBASIC17.21■□□□□ 0.35
ZIC3O60481 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZIC3O60481 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.21■□□□□ 0.35
ZIC3O60481 FEM1AP3-201ENST00000403722 1741 ntBASIC17.21■□□□□ 0.35
ZIC3O60481 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZIC3O60481 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZIC3O60481 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.2■□□□□ 0.34
ZIC3O60481 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 AC007663.1-201ENST00000438948 1240 ntBASIC17.2■□□□□ 0.34
ZIC3O60481 AC128688.1-201ENST00000487626 519 ntBASIC17.2■□□□□ 0.34
ZIC3O60481 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.2■□□□□ 0.34
ZIC3O60481 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.2■□□□□ 0.34
ZIC3O60481 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.2■□□□□ 0.34
ZIC3O60481 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ZIC3O60481 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ZIC3O60481 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.2■□□□□ 0.34
ZIC3O60481 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZIC3O60481 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZIC3O60481 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ZIC3O60481 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 IRX1P1-201ENST00000438849 1838 ntBASIC17.19■□□□□ 0.34
ZIC3O60481 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.19■□□□□ 0.34
ZIC3O60481 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ZIC3O60481 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.19■□□□□ 0.34
ZIC3O60481 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZIC3O60481 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms