Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SNAI2O43623 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.28□□□□□ -0.12
SNAI2O43623 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.28□□□□□ -0.12
SNAI2O43623 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.28□□□□□ -0.12
SNAI2O43623 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.28□□□□□ -0.12
SNAI2O43623 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.28□□□□□ -0.12
SNAI2O43623 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SNAI2O43623 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SNAI2O43623 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.28□□□□□ -0.12
SNAI2O43623 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SNAI2O43623 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNAI2O43623 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SNAI2O43623 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.27□□□□□ -0.12
SNAI2O43623 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.27□□□□□ -0.12
SNAI2O43623 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.27□□□□□ -0.12
SNAI2O43623 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNAI2O43623 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.27□□□□□ -0.12
SNAI2O43623 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.27□□□□□ -0.12
SNAI2O43623 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 KRT18P68-201ENST00000392293 1000 ntBASIC14.27□□□□□ -0.13
SNAI2O43623 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.27□□□□□ -0.13
SNAI2O43623 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.27□□□□□ -0.13
SNAI2O43623 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.27□□□□□ -0.13
SNAI2O43623 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.27□□□□□ -0.13
SNAI2O43623 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.27□□□□□ -0.13
SNAI2O43623 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 AC006333.2-201ENST00000607957 2099 ntBASIC14.27□□□□□ -0.13
SNAI2O43623 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SNAI2O43623 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.27□□□□□ -0.13
SNAI2O43623 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.27□□□□□ -0.13
SNAI2O43623 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.27□□□□□ -0.13
SNAI2O43623 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SNAI2O43623 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNAI2O43623 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SNAI2O43623 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.26□□□□□ -0.13
SNAI2O43623 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SNAI2O43623 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SNAI2O43623 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.26□□□□□ -0.13
SNAI2O43623 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SNAI2O43623 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SNAI2O43623 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.26□□□□□ -0.13
SNAI2O43623 CROCCP1-201ENST00000426910 5675 ntBASIC14.26□□□□□ -0.13
SNAI2O43623 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNAI2O43623 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms