Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SDHDO14521 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHDO14521 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SDHDO14521 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.48■□□□□ 0.55
SDHDO14521 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SDHDO14521 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SDHDO14521 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.47■□□□□ 0.55
SDHDO14521 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 NOC2LP2-201ENST00000407594 1944 ntBASIC18.47■□□□□ 0.55
SDHDO14521 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.47■□□□□ 0.55
SDHDO14521 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.47■□□□□ 0.55
SDHDO14521 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
SDHDO14521 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.47■□□□□ 0.55
SDHDO14521 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.47■□□□□ 0.55
SDHDO14521 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 AC091874.3-201ENST00000512672 1195 ntBASIC18.47■□□□□ 0.55
SDHDO14521 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.47■□□□□ 0.55
SDHDO14521 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.47■□□□□ 0.55
SDHDO14521 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.47■□□□□ 0.55
SDHDO14521 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.47■□□□□ 0.55
SDHDO14521 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SDHDO14521 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.47■□□□□ 0.55
SDHDO14521 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
SDHDO14521 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SDHDO14521 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SDHDO14521 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHDO14521 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.46■□□□□ 0.55
SDHDO14521 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SDHDO14521 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.46■□□□□ 0.55
SDHDO14521 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.46■□□□□ 0.55
SDHDO14521 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SDHDO14521 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.46■□□□□ 0.55
SDHDO14521 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHDO14521 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SDHDO14521 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SDHDO14521 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SDHDO14521 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SDHDO14521 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.45■□□□□ 0.54
SDHDO14521 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHDO14521 TUBB8P6-201ENST00000436895 1288 ntBASIC18.45■□□□□ 0.54
SDHDO14521 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHDO14521 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SDHDO14521 AC092118.2-201ENST00000613495 667 ntBASIC18.45■□□□□ 0.54
SDHDO14521 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHDO14521 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SDHDO14521 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.45■□□□□ 0.54
SDHDO14521 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHDO14521 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SDHDO14521 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms