Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 AC145285.3-201ENST00000564603 959 ntBASIC20.36■□□□□ 0.85
SOX1O00570 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.36■□□□□ 0.85
SOX1O00570 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 FAM197Y3-203ENST00000618346 717 ntBASIC20.36■□□□□ 0.85
SOX1O00570 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX1O00570 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 AC036111.1-201ENST00000533973 1582 ntBASIC20.36■□□□□ 0.85
SOX1O00570 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX1O00570 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SOX1O00570 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SOX1O00570 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SOX1O00570 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
SOX1O00570 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX1O00570 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX1O00570 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SOX1O00570 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX1O00570 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
SOX1O00570 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
SOX1O00570 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX1O00570 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX1O00570 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX1O00570 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SOX1O00570 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SOX1O00570 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 AC121338.2-201ENST00000622535 1744 ntBASIC20.34■□□□□ 0.85
SOX1O00570 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.34■□□□□ 0.85
SOX1O00570 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX1O00570 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX1O00570 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.34■□□□□ 0.85
SOX1O00570 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.34■□□□□ 0.85
SOX1O00570 AL355877.3-201ENST00000622820 899 ntBASIC20.34■□□□□ 0.85
SOX1O00570 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX1O00570 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SOX1O00570 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX1O00570 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOX1O00570 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
SOX1O00570 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOX1O00570 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SOX1O00570 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SOX1O00570 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX1O00570 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.33■□□□□ 0.85
SOX1O00570 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.33■□□□□ 0.85
SOX1O00570 MIR3917-201ENST00000580971 93 ntBASIC20.33■□□□□ 0.85
SOX1O00570 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
SOX1O00570 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX1O00570 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.33■□□□□ 0.84
SOX1O00570 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX1O00570 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.33■□□□□ 0.84
SOX1O00570 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SOX1O00570 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX1O00570 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SOX1O00570 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.32■□□□□ 0.84
SOX1O00570 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.32■□□□□ 0.84
SOX1O00570 COX20P2-201ENST00000452636 358 ntBASIC20.32■□□□□ 0.84
SOX1O00570 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.32■□□□□ 0.84
SOX1O00570 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.32■□□□□ 0.84
SOX1O00570 AC008608.2-201ENST00000606089 416 ntBASIC20.32■□□□□ 0.84
SOX1O00570 AL592071.1-201ENST00000611956 408 ntBASIC20.32■□□□□ 0.84
SOX1O00570 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SOX1O00570 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 GPAT2P1-201ENST00000444924 1672 ntBASIC20.32■□□□□ 0.84
SOX1O00570 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.32■□□□□ 0.84
SOX1O00570 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX1O00570 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX1O00570 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX1O00570 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SOX1O00570 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms