Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.66■□□□□ 0.74
DFFAO00273 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.66■□□□□ 0.74
DFFAO00273 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DFFAO00273 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.66■□□□□ 0.74
DFFAO00273 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.66■□□□□ 0.74
DFFAO00273 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
DFFAO00273 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DFFAO00273 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.66■□□□□ 0.74
DFFAO00273 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
DFFAO00273 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DFFAO00273 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DFFAO00273 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
DFFAO00273 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
DFFAO00273 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.65■□□□□ 0.74
DFFAO00273 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
DFFAO00273 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.65■□□□□ 0.74
DFFAO00273 AC026271.3-201ENST00000571884 352 ntBASIC19.65■□□□□ 0.74
DFFAO00273 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DFFAO00273 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.65■□□□□ 0.74
DFFAO00273 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 RNF165-205ENST00000588679 2904 ntBASIC19.65■□□□□ 0.74
DFFAO00273 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DFFAO00273 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
DFFAO00273 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
DFFAO00273 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
DFFAO00273 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 AC004951.3-201ENST00000418645 1148 ntBASIC19.64■□□□□ 0.73
DFFAO00273 TSPY7P-201ENST00000431358 1114 ntBASIC19.64■□□□□ 0.73
DFFAO00273 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.64■□□□□ 0.73
DFFAO00273 AC011298.2-201ENST00000617989 482 ntBASIC19.64■□□□□ 0.73
DFFAO00273 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
DFFAO00273 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DFFAO00273 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
DFFAO00273 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.64■□□□□ 0.73
DFFAO00273 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DFFAO00273 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.64■□□□□ 0.73
DFFAO00273 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.63■□□□□ 0.73
DFFAO00273 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.63■□□□□ 0.73
DFFAO00273 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.63■□□□□ 0.73
DFFAO00273 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.63■□□□□ 0.73
DFFAO00273 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DFFAO00273 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
DFFAO00273 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
DFFAO00273 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.63■□□□□ 0.73
DFFAO00273 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.63■□□□□ 0.73
DFFAO00273 AL355355.2-201ENST00000442321 338 ntBASIC19.63■□□□□ 0.73
DFFAO00273 SNORA78-201ENST00000459373 127 ntBASIC19.63■□□□□ 0.73
DFFAO00273 AC011506.1-201ENST00000474329 610 ntBASIC19.63■□□□□ 0.73
DFFAO00273 AC091390.4-202ENST00000476426 537 ntBASIC19.63■□□□□ 0.73
DFFAO00273 AC093827.2-201ENST00000512654 315 ntBASIC19.63■□□□□ 0.73
DFFAO00273 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.63■□□□□ 0.73
DFFAO00273 MIR6786-201ENST00000616843 113 ntBASIC19.63■□□□□ 0.73
DFFAO00273 AC066615.1-201ENST00000640911 628 ntBASIC19.63■□□□□ 0.73
DFFAO00273 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.63■□□□□ 0.73
DFFAO00273 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
DFFAO00273 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DFFAO00273 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
DFFAO00273 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFAO00273 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.62■□□□□ 0.73
DFFAO00273 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms