Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RCCD1A6NED2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.35■□□□□ 0.85
RCCD1A6NED2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RCCD1A6NED2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.34■□□□□ 0.85
RCCD1A6NED2 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.34■□□□□ 0.85
RCCD1A6NED2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.34■□□□□ 0.85
RCCD1A6NED2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCCD1A6NED2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RCCD1A6NED2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RCCD1A6NED2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RCCD1A6NED2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCCD1A6NED2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCCD1A6NED2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RCCD1A6NED2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCCD1A6NED2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.33■□□□□ 0.85
RCCD1A6NED2 AL121832.2-201ENST00000610979 668 ntBASIC20.33■□□□□ 0.85
RCCD1A6NED2 AC120498.8-201ENST00000614275 531 ntBASIC20.33■□□□□ 0.85
RCCD1A6NED2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCCD1A6NED2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
RCCD1A6NED2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RCCD1A6NED2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RCCD1A6NED2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCCD1A6NED2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RCCD1A6NED2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.33■□□□□ 0.84
RCCD1A6NED2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCCD1A6NED2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RCCD1A6NED2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.33■□□□□ 0.84
RCCD1A6NED2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCCD1A6NED2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RCCD1A6NED2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 AC126763.1-201ENST00000552015 2118 ntBASIC20.32■□□□□ 0.84
RCCD1A6NED2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.32■□□□□ 0.84
RCCD1A6NED2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 TUBB8P6-201ENST00000436895 1288 ntBASIC20.32■□□□□ 0.84
RCCD1A6NED2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 HLA-B-256ENST00000639848 1089 ntBASIC20.32■□□□□ 0.84
RCCD1A6NED2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCCD1A6NED2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.32■□□□□ 0.84
RCCD1A6NED2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.32■□□□□ 0.84
RCCD1A6NED2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RCCD1A6NED2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.31■□□□□ 0.84
RCCD1A6NED2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RCCD1A6NED2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.31■□□□□ 0.84
RCCD1A6NED2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.31■□□□□ 0.84
RCCD1A6NED2 PNMA6B-201ENST00000538162 1200 ntBASIC20.31■□□□□ 0.84
RCCD1A6NED2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.31■□□□□ 0.84
RCCD1A6NED2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCCD1A6NED2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms