Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SYCE3A1L190 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.77■■□□□ 1.08
SYCE3A1L190 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.77■■□□□ 1.08
SYCE3A1L190 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 AC005837.3-201ENST00000612163 286 ntBASIC21.77■■□□□ 1.08
SYCE3A1L190 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
SYCE3A1L190 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 AC068338.2-201ENST00000563278 1430 ntBASIC21.77■■□□□ 1.08
SYCE3A1L190 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.77■■□□□ 1.08
SYCE3A1L190 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SYCE3A1L190 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SYCE3A1L190 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
SYCE3A1L190 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.76■■□□□ 1.07
SYCE3A1L190 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.76■■□□□ 1.07
SYCE3A1L190 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SYCE3A1L190 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SYCE3A1L190 AC138932.1-201ENST00000534164 6830 ntBASIC21.76■■□□□ 1.07
SYCE3A1L190 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.76■■□□□ 1.07
SYCE3A1L190 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SYCE3A1L190 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SYCE3A1L190 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYCE3A1L190 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.75■■□□□ 1.07
SYCE3A1L190 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SYCE3A1L190 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SYCE3A1L190 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.75■■□□□ 1.07
SYCE3A1L190 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.75■■□□□ 1.07
SYCE3A1L190 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.75■■□□□ 1.07
SYCE3A1L190 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SYCE3A1L190 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
SYCE3A1L190 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.75■■□□□ 1.07
SYCE3A1L190 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.75■■□□□ 1.07
SYCE3A1L190 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SYCE3A1L190 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYCE3A1L190 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SYCE3A1L190 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SYCE3A1L190 AC139713.2-201ENST00000641328 2723 ntBASIC21.74■■□□□ 1.07
SYCE3A1L190 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.74■■□□□ 1.07
SYCE3A1L190 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.74■■□□□ 1.07
SYCE3A1L190 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYCE3A1L190 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.74■■□□□ 1.07
SYCE3A1L190 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SYCE3A1L190 AC126763.1-201ENST00000552015 2118 ntBASIC21.74■■□□□ 1.07
SYCE3A1L190 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SYCE3A1L190 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.74■■□□□ 1.07
SYCE3A1L190 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYCE3A1L190 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYCE3A1L190 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYCE3A1L190 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYCE3A1L190 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYCE3A1L190 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYCE3A1L190 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.73■■□□□ 1.07
SYCE3A1L190 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SYCE3A1L190 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYCE3A1L190 FEM1AP3-201ENST00000403722 1741 ntBASIC21.73■■□□□ 1.07
SYCE3A1L190 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYCE3A1L190 CNN2P6-201ENST00000439038 900 ntBASIC21.73■■□□□ 1.07
SYCE3A1L190 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYCE3A1L190 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYCE3A1L190 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SYCE3A1L190 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SYCE3A1L190 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
SYCE3A1L190 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.72■■□□□ 1.07
SYCE3A1L190 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SYCE3A1L190 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SYCE3A1L190 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYCE3A1L190 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYCE3A1L190 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.72■■□□□ 1.07
SYCE3A1L190 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.72■■□□□ 1.07
SYCE3A1L190 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SYCE3A1L190 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.72■■□□□ 1.07
SYCE3A1L190 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.72■■□□□ 1.07
SYCE3A1L190 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.72■■□□□ 1.07
SYCE3A1L190 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SYCE3A1L190 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SYCE3A1L190 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms