Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRDV1A0A1B0GX56 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRDV1A0A1B0GX56 HCG11-201ENST00000411553 5696 ntBASIC16.83■□□□□ 0.29
TRDV1A0A1B0GX56 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRDV1A0A1B0GX56 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.83■□□□□ 0.29
TRDV1A0A1B0GX56 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TRDV1A0A1B0GX56 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 KRT18P61-201ENST00000585825 1298 ntBASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRDV1A0A1B0GX56 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 ESPNP-201ENST00000270691 2015 ntBASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TRDV1A0A1B0GX56 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRDV1A0A1B0GX56 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms