Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 AC006333.2-201ENST00000607957 2099 ntBASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV7-9A0A0J9YWB2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV7-9A0A0J9YWB2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 AL356309.3-201ENST00000624132 1934 ntBASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 IRX1P1-201ENST00000438849 1838 ntBASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 FEM1AP3-201ENST00000403722 1741 ntBASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV7-9A0A0J9YWB2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 PNMA6B-201ENST00000538162 1200 ntBASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 AC120498.8-201ENST00000614275 531 ntBASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRBV7-9A0A0J9YWB2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV7-9A0A0J9YWB2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRBV7-9A0A0J9YWB2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRBV7-9A0A0J9YWB2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRBV7-9A0A0J9YWB2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRBV7-9A0A0J9YWB2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV7-9A0A0J9YWB2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms