Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 TSPY26P-201ENST00000476365 1326 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 MIR572-201ENST00000384983 95 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4L2-201ENST00000561772 1275 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 TPRG1LP1-201ENST00000598702 760 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4L6-201ENST00000626483 1275 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4L1-201ENST00000627662 1275 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4L8-201ENST00000629013 1275 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4L3-201ENST00000630187 1275 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4L7-201ENST00000630678 1275 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 DUX4L5-201ENST00000630834 1275 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 AC083906.6-201ENST00000641366 219 ntBASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV12-1A0A0B4J245 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
TRAV12-1A0A0B4J245 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 AC012313.1-201ENST00000593393 3059 ntBASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV12-1A0A0B4J245 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms