Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
LINC01558Q9Y6Z2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01558Q9Y6Z2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01558Q9Y6Z2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01558Q9Y6Z2 AL139393.2-201ENST00000608721 2025 ntBASIC13.39□□□□□ -0.27
LINC01558Q9Y6Z2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC01558Q9Y6Z2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01558Q9Y6Z2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01558Q9Y6Z2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01558Q9Y6Z2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC01558Q9Y6Z2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01558Q9Y6Z2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01558Q9Y6Z2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01558Q9Y6Z2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01558Q9Y6Z2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01558Q9Y6Z2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.37□□□□□ -0.27
LINC01558Q9Y6Z2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01558Q9Y6Z2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01558Q9Y6Z2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01558Q9Y6Z2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01558Q9Y6Z2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
LINC01558Q9Y6Z2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01558Q9Y6Z2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01558Q9Y6Z2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01558Q9Y6Z2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC01558Q9Y6Z2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC01558Q9Y6Z2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01558Q9Y6Z2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01558Q9Y6Z2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01558Q9Y6Z2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01558Q9Y6Z2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01558Q9Y6Z2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01558Q9Y6Z2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC01558Q9Y6Z2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01558Q9Y6Z2 BX255925.1-201ENST00000566954 1854 ntBASIC13.34□□□□□ -0.27
LINC01558Q9Y6Z2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.34□□□□□ -0.27
LINC01558Q9Y6Z2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01558Q9Y6Z2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01558Q9Y6Z2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01558Q9Y6Z2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LINC01558Q9Y6Z2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01558Q9Y6Z2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01558Q9Y6Z2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01558Q9Y6Z2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01558Q9Y6Z2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01558Q9Y6Z2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01558Q9Y6Z2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01558Q9Y6Z2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01558Q9Y6Z2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 AC145676.1-201ENST00000514988 2004 ntBASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01558Q9Y6Z2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01558Q9Y6Z2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01558Q9Y6Z2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01558Q9Y6Z2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01558Q9Y6Z2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01558Q9Y6Z2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01558Q9Y6Z2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01558Q9Y6Z2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01558Q9Y6Z2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01558Q9Y6Z2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
LINC01558Q9Y6Z2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01558Q9Y6Z2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01558Q9Y6Z2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01558Q9Y6Z2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC01558Q9Y6Z2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01558Q9Y6Z2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01558Q9Y6Z2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01558Q9Y6Z2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01558Q9Y6Z2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01558Q9Y6Z2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01558Q9Y6Z2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms