Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.9■■□□□ 1.42
CLCA3PQ9Y6N3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCA3PQ9Y6N3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.89■■□□□ 1.41
CLCA3PQ9Y6N3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.89■■□□□ 1.41
CLCA3PQ9Y6N3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLCA3PQ9Y6N3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 CR559946.2-201ENST00000623684 991 ntBASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 AC100797.4-201ENST00000631653 1827 ntBASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 AC016575.1-201ENST00000607026 382 ntBASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 HLA-V-202ENST00000446817 847 ntBASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CLCA3PQ9Y6N3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CLCA3PQ9Y6N3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CLCA3PQ9Y6N3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCA3PQ9Y6N3 AC110285.7-201ENST00000624417 1536 ntBASIC23.83■■□□□ 1.41
CLCA3PQ9Y6N3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.83■■□□□ 1.4
CLCA3PQ9Y6N3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCA3PQ9Y6N3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
CLCA3PQ9Y6N3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCA3PQ9Y6N3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCA3PQ9Y6N3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCA3PQ9Y6N3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CLCA3PQ9Y6N3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCA3PQ9Y6N3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.77■■□□□ 1.4
CLCA3PQ9Y6N3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
CLCA3PQ9Y6N3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCA3PQ9Y6N3 MIR639-201ENST00000384974 98 ntBASIC23.76■■□□□ 1.39
CLCA3PQ9Y6N3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.76■■□□□ 1.39
CLCA3PQ9Y6N3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CLCA3PQ9Y6N3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.75■■□□□ 1.39
CLCA3PQ9Y6N3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CLCA3PQ9Y6N3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CLCA3PQ9Y6N3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCA3PQ9Y6N3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CLCA3PQ9Y6N3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 AC008813.1-201ENST00000536597 885 ntBASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLCA3PQ9Y6N3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCA3PQ9Y6N3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCA3PQ9Y6N3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.66■■□□□ 1.38
CLCA3PQ9Y6N3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CLCA3PQ9Y6N3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.66■■□□□ 1.38
CLCA3PQ9Y6N3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms