Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS1Q9Y6A9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS1Q9Y6A9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS1Q9Y6A9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS1Q9Y6A9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPCS1Q9Y6A9 CLDN5-201ENST00000403084 2357 ntBASIC17.58■□□□□ 0.41
SPCS1Q9Y6A9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SPCS1Q9Y6A9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.58■□□□□ 0.4
SPCS1Q9Y6A9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 AC012676.1-201ENST00000574705 1949 ntBASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS1Q9Y6A9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS1Q9Y6A9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPCS1Q9Y6A9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPCS1Q9Y6A9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPCS1Q9Y6A9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SPCS1Q9Y6A9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPCS1Q9Y6A9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPCS1Q9Y6A9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS1Q9Y6A9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPCS1Q9Y6A9 AC091060.1-201ENST00000623524 1766 ntBASIC17.51■□□□□ 0.39
SPCS1Q9Y6A9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS1Q9Y6A9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 AC079834.2-201ENST00000609776 1949 ntBASIC17.49■□□□□ 0.39
SPCS1Q9Y6A9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS1Q9Y6A9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS1Q9Y6A9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS1Q9Y6A9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS1Q9Y6A9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
SPCS1Q9Y6A9 BX255925.1-201ENST00000566954 1854 ntBASIC17.46■□□□□ 0.38
SPCS1Q9Y6A9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms