Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA13Q9Y5I0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA13Q9Y5I0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.14■■□□□ 1.93
PCDHA13Q9Y5I0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.13■■□□□ 1.93
PCDHA13Q9Y5I0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.13■■□□□ 1.93
PCDHA13Q9Y5I0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA13Q9Y5I0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA13Q9Y5I0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA13Q9Y5I0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.12■■□□□ 1.93
PCDHA13Q9Y5I0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA13Q9Y5I0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHA13Q9Y5I0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.11■■□□□ 1.93
PCDHA13Q9Y5I0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHA13Q9Y5I0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA13Q9Y5I0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA13Q9Y5I0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA13Q9Y5I0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA13Q9Y5I0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDHA13Q9Y5I0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA13Q9Y5I0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA13Q9Y5I0 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.08■■□□□ 1.93
PCDHA13Q9Y5I0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA13Q9Y5I0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.07■■□□□ 1.92
PCDHA13Q9Y5I0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.07■■□□□ 1.92
PCDHA13Q9Y5I0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.07■■□□□ 1.92
PCDHA13Q9Y5I0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHA13Q9Y5I0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHA13Q9Y5I0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA13Q9Y5I0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.05■■□□□ 1.92
PCDHA13Q9Y5I0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.05■■□□□ 1.92
PCDHA13Q9Y5I0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.05■■□□□ 1.92
PCDHA13Q9Y5I0 AC135983.2-203ENST00000454486 1613 ntBASIC27.05■■□□□ 1.92
PCDHA13Q9Y5I0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA13Q9Y5I0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA13Q9Y5I0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHA13Q9Y5I0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA13Q9Y5I0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDHA13Q9Y5I0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.02■■□□□ 1.92
PCDHA13Q9Y5I0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA13Q9Y5I0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA13Q9Y5I0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
PCDHA13Q9Y5I0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA13Q9Y5I0 AC018358.1-201ENST00000631079 1402 ntBASIC27■■□□□ 1.91
PCDHA13Q9Y5I0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA13Q9Y5I0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA13Q9Y5I0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA13Q9Y5I0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.99■■□□□ 1.91
PCDHA13Q9Y5I0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA13Q9Y5I0 AL449106.1-201ENST00000608517 1980 ntBASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 WHAMMP2-203ENST00000563942 1603 ntBASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHA13Q9Y5I0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA13Q9Y5I0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.97■■□□□ 1.91
PCDHA13Q9Y5I0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA13Q9Y5I0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA13Q9Y5I0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA13Q9Y5I0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
PCDHA13Q9Y5I0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.95■■□□□ 1.91
PCDHA13Q9Y5I0 AC005559.1-201ENST00000589661 871 ntBASIC26.95■■□□□ 1.9
PCDHA13Q9Y5I0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHA13Q9Y5I0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHA13Q9Y5I0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
PCDHA13Q9Y5I0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
PCDHA13Q9Y5I0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
PCDHA13Q9Y5I0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHA13Q9Y5I0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHA13Q9Y5I0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHA13Q9Y5I0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
PCDHA13Q9Y5I0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.93■■□□□ 1.9
PCDHA13Q9Y5I0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.93■■□□□ 1.9
PCDHA13Q9Y5I0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.93■■□□□ 1.9
PCDHA13Q9Y5I0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
PCDHA13Q9Y5I0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms