Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
PCDHGA2Q9Y5H1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PCDHGA2Q9Y5H1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGA2Q9Y5H1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGA2Q9Y5H1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHGA2Q9Y5H1 AC092296.2-201ENST00000589470 999 ntBASIC25.86■■□□□ 1.73
PCDHGA2Q9Y5H1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.85■■□□□ 1.73
PCDHGA2Q9Y5H1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA2Q9Y5H1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA2Q9Y5H1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PCDHGA2Q9Y5H1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGA2Q9Y5H1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGA2Q9Y5H1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.84■■□□□ 1.73
PCDHGA2Q9Y5H1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHGA2Q9Y5H1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGA2Q9Y5H1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
PCDHGA2Q9Y5H1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGA2Q9Y5H1 ECEL1P2-201ENST00000461596 1295 ntBASIC25.82■■□□□ 1.72
PCDHGA2Q9Y5H1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGA2Q9Y5H1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGA2Q9Y5H1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHGA2Q9Y5H1 AC010864.1-201ENST00000609407 1511 ntBASIC25.8■■□□□ 1.72
PCDHGA2Q9Y5H1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
PCDHGA2Q9Y5H1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGA2Q9Y5H1 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.8■■□□□ 1.72
PCDHGA2Q9Y5H1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHGA2Q9Y5H1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
PCDHGA2Q9Y5H1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA2Q9Y5H1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA2Q9Y5H1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHGA2Q9Y5H1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA2Q9Y5H1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.79■■□□□ 1.72
PCDHGA2Q9Y5H1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.79■■□□□ 1.72
PCDHGA2Q9Y5H1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA2Q9Y5H1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHGA2Q9Y5H1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA2Q9Y5H1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA2Q9Y5H1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.78■■□□□ 1.72
PCDHGA2Q9Y5H1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGA2Q9Y5H1 AL035685.1-201ENST00000636663 812 ntBASIC25.78■■□□□ 1.72
PCDHGA2Q9Y5H1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGA2Q9Y5H1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHGA2Q9Y5H1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHGA2Q9Y5H1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHGA2Q9Y5H1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHGA2Q9Y5H1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGA2Q9Y5H1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHGA2Q9Y5H1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGA2Q9Y5H1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHGA2Q9Y5H1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA2Q9Y5H1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA2Q9Y5H1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHGA2Q9Y5H1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
PCDHGA2Q9Y5H1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA2Q9Y5H1 AC135983.2-203ENST00000454486 1613 ntBASIC25.74■■□□□ 1.71
PCDHGA2Q9Y5H1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGA2Q9Y5H1 AC110285.7-201ENST00000624417 1536 ntBASIC25.73■■□□□ 1.71
PCDHGA2Q9Y5H1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGA2Q9Y5H1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
PCDHGA2Q9Y5H1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHGA2Q9Y5H1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.72■■□□□ 1.71
PCDHGA2Q9Y5H1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA2Q9Y5H1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA2Q9Y5H1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA2Q9Y5H1 WHAMMP2-203ENST00000563942 1603 ntBASIC25.71■■□□□ 1.71
PCDHGA2Q9Y5H1 AC019069.1-201ENST00000610008 1333 ntBASIC25.71■■□□□ 1.71
PCDHGA2Q9Y5H1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.71■■□□□ 1.71
PCDHGA2Q9Y5H1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHGA2Q9Y5H1 MIR219A2-201ENST00000608502 1504 ntBASIC25.71■■□□□ 1.71
PCDHGA2Q9Y5H1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
PCDHGA2Q9Y5H1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGA2Q9Y5H1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGA2Q9Y5H1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGA2Q9Y5H1 AL592295.1-201ENST00000400984 884 ntBASIC25.69■■□□□ 1.7
PCDHGA2Q9Y5H1 AC126177.7-201ENST00000547904 679 ntBASIC25.69■■□□□ 1.7
PCDHGA2Q9Y5H1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHGA2Q9Y5H1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA2Q9Y5H1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PCDHGA2Q9Y5H1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHGA2Q9Y5H1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA2Q9Y5H1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA2Q9Y5H1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA2Q9Y5H1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA2Q9Y5H1 AL451085.2-201ENST00000605085 799 ntBASIC25.67■■□□□ 1.7
PCDHGA2Q9Y5H1 AC129492.7-201ENST00000622992 756 ntBASIC25.67■■□□□ 1.7
PCDHGA2Q9Y5H1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PCDHGA2Q9Y5H1 AL161658.1-201ENST00000623641 1967 ntBASIC25.66■■□□□ 1.7
PCDHGA2Q9Y5H1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA2Q9Y5H1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA2Q9Y5H1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA2Q9Y5H1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHGA2Q9Y5H1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PCDHGA2Q9Y5H1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA2Q9Y5H1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA2Q9Y5H1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA2Q9Y5H1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHGA2Q9Y5H1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHGA2Q9Y5H1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA2Q9Y5H1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHGA2Q9Y5H1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms