Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB6Q9Y5F9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDHGB6Q9Y5F9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDHGB6Q9Y5F9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHGB6Q9Y5F9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB6Q9Y5F9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGB6Q9Y5F9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHGB6Q9Y5F9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGB6Q9Y5F9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHGB6Q9Y5F9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB6Q9Y5F9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB6Q9Y5F9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGB6Q9Y5F9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB6Q9Y5F9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHGB6Q9Y5F9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB6Q9Y5F9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHGB6Q9Y5F9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB6Q9Y5F9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB6Q9Y5F9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGB6Q9Y5F9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB6Q9Y5F9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHGB6Q9Y5F9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB6Q9Y5F9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGB6Q9Y5F9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGB6Q9Y5F9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGB6Q9Y5F9 AC142086.6-201ENST00000621154 1765 ntBASIC23.76■■□□□ 1.39
PCDHGB6Q9Y5F9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGB6Q9Y5F9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB6Q9Y5F9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB6Q9Y5F9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PCDHGB6Q9Y5F9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGB6Q9Y5F9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDHGB6Q9Y5F9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGB6Q9Y5F9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB6Q9Y5F9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB6Q9Y5F9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB6Q9Y5F9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB6Q9Y5F9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB6Q9Y5F9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB6Q9Y5F9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB6Q9Y5F9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB6Q9Y5F9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB6Q9Y5F9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDHGB6Q9Y5F9 HSD17B1P1-201ENST00000590052 955 ntBASIC23.71■■□□□ 1.39
PCDHGB6Q9Y5F9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGB6Q9Y5F9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGB6Q9Y5F9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB6Q9Y5F9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHGB6Q9Y5F9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB6Q9Y5F9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB6Q9Y5F9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB6Q9Y5F9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGB6Q9Y5F9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB6Q9Y5F9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB6Q9Y5F9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGB6Q9Y5F9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGB6Q9Y5F9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGB6Q9Y5F9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGB6Q9Y5F9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGB6Q9Y5F9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB6Q9Y5F9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHGB6Q9Y5F9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB6Q9Y5F9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDHGB6Q9Y5F9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHGB6Q9Y5F9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGB6Q9Y5F9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGB6Q9Y5F9 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.64■■□□□ 1.37
PCDHGB6Q9Y5F9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHGB6Q9Y5F9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHGB6Q9Y5F9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PCDHGB6Q9Y5F9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGB6Q9Y5F9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDHGB6Q9Y5F9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB6Q9Y5F9 AC127502.1-201ENST00000399971 1502 ntBASIC23.61■■□□□ 1.37
PCDHGB6Q9Y5F9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
PCDHGB6Q9Y5F9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB6Q9Y5F9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGB6Q9Y5F9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB6Q9Y5F9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PCDHGB6Q9Y5F9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB6Q9Y5F9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHGB6Q9Y5F9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB6Q9Y5F9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHGB6Q9Y5F9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGB6Q9Y5F9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGB6Q9Y5F9 AC135983.2-203ENST00000454486 1613 ntBASIC23.59■■□□□ 1.37
PCDHGB6Q9Y5F9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGB6Q9Y5F9 AP004833.2-201ENST00000532228 1454 ntBASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms