Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
HMG20BQ9P0W2 AC110285.7-201ENST00000624417 1536 ntBASIC31.16■■■□□ 2.58
HMG20BQ9P0W2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
HMG20BQ9P0W2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
HMG20BQ9P0W2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
HMG20BQ9P0W2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
HMG20BQ9P0W2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.15■■■□□ 2.58
HMG20BQ9P0W2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
HMG20BQ9P0W2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.14■■■□□ 2.58
HMG20BQ9P0W2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.14■■■□□ 2.58
HMG20BQ9P0W2 AL139393.2-201ENST00000608721 2025 ntBASIC31.14■■■□□ 2.57
HMG20BQ9P0W2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMG20BQ9P0W2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMG20BQ9P0W2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
HMG20BQ9P0W2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
HMG20BQ9P0W2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HMG20BQ9P0W2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
HMG20BQ9P0W2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
HMG20BQ9P0W2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.1■■■□□ 2.57
HMG20BQ9P0W2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
HMG20BQ9P0W2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
HMG20BQ9P0W2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
HMG20BQ9P0W2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.09■■■□□ 2.57
HMG20BQ9P0W2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HMG20BQ9P0W2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.08■■■□□ 2.57
HMG20BQ9P0W2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
HMG20BQ9P0W2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
HMG20BQ9P0W2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.08■■■□□ 2.57
HMG20BQ9P0W2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HMG20BQ9P0W2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.07■■■□□ 2.56
HMG20BQ9P0W2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HMG20BQ9P0W2 AC100797.4-201ENST00000631653 1827 ntBASIC31.06■■■□□ 2.56
HMG20BQ9P0W2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
HMG20BQ9P0W2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
HMG20BQ9P0W2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.06■■■□□ 2.56
HMG20BQ9P0W2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.05■■■□□ 2.56
HMG20BQ9P0W2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
HMG20BQ9P0W2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
HMG20BQ9P0W2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
HMG20BQ9P0W2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
HMG20BQ9P0W2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
HMG20BQ9P0W2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.03■■■□□ 2.56
HMG20BQ9P0W2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
HMG20BQ9P0W2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.03■■■□□ 2.56
HMG20BQ9P0W2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.03■■■□□ 2.56
HMG20BQ9P0W2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 AC008813.1-201ENST00000536597 885 ntBASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HMG20BQ9P0W2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.01■■■□□ 2.56
HMG20BQ9P0W2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.01■■■□□ 2.56
HMG20BQ9P0W2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HMG20BQ9P0W2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31■■■□□ 2.55
HMG20BQ9P0W2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
HMG20BQ9P0W2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.99■■■□□ 2.55
HMG20BQ9P0W2 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.99■■■□□ 2.55
HMG20BQ9P0W2 HSD17B1P1-201ENST00000590052 955 ntBASIC30.99■■■□□ 2.55
HMG20BQ9P0W2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
HMG20BQ9P0W2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
HMG20BQ9P0W2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
HMG20BQ9P0W2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.97■■■□□ 2.55
HMG20BQ9P0W2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.97■■■□□ 2.55
HMG20BQ9P0W2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
HMG20BQ9P0W2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.96■■■□□ 2.55
HMG20BQ9P0W2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.94■■■□□ 2.54
HMG20BQ9P0W2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
HMG20BQ9P0W2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
HMG20BQ9P0W2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.94■■■□□ 2.54
HMG20BQ9P0W2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
HMG20BQ9P0W2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.93■■■□□ 2.54
HMG20BQ9P0W2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.93■■■□□ 2.54
HMG20BQ9P0W2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HMG20BQ9P0W2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
HMG20BQ9P0W2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
HMG20BQ9P0W2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
HMG20BQ9P0W2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HMG20BQ9P0W2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
HMG20BQ9P0W2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.91■■■□□ 2.54
HMG20BQ9P0W2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
HMG20BQ9P0W2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.9■■■□□ 2.54
HMG20BQ9P0W2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HMG20BQ9P0W2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
HMG20BQ9P0W2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
HMG20BQ9P0W2 AC148477.6-201ENST00000623746 465 ntBASIC30.89■■■□□ 2.54
HMG20BQ9P0W2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMG20BQ9P0W2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
HMG20BQ9P0W2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms