Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
EMC3Q9P0I2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.85■■□□□ 1.25
EMC3Q9P0I2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.85■■□□□ 1.25
EMC3Q9P0I2 WHAMMP2-203ENST00000563942 1603 ntBASIC22.85■■□□□ 1.25
EMC3Q9P0I2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
EMC3Q9P0I2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
EMC3Q9P0I2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.84■■□□□ 1.25
EMC3Q9P0I2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.84■■□□□ 1.25
EMC3Q9P0I2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
EMC3Q9P0I2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.83■■□□□ 1.25
EMC3Q9P0I2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
EMC3Q9P0I2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
EMC3Q9P0I2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.83■■□□□ 1.25
EMC3Q9P0I2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
EMC3Q9P0I2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
EMC3Q9P0I2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
EMC3Q9P0I2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.81■■□□□ 1.24
EMC3Q9P0I2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
EMC3Q9P0I2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.81■■□□□ 1.24
EMC3Q9P0I2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
EMC3Q9P0I2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
EMC3Q9P0I2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.8■■□□□ 1.24
EMC3Q9P0I2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L13-201ENST00000554103 1267 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L15-201ENST00000611059 1267 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L23-201ENST00000615195 1269 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L24-201ENST00000617576 1269 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L22-201ENST00000618238 1269 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L20-201ENST00000619712 1269 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L21-201ENST00000622058 1269 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L10-201ENST00000622460 1267 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 DUX4L25-201ENST00000624915 1269 ntBASIC22.8■■□□□ 1.24
EMC3Q9P0I2 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.8■■□□□ 1.24
EMC3Q9P0I2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.79■■□□□ 1.24
EMC3Q9P0I2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.79■■□□□ 1.24
EMC3Q9P0I2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.79■■□□□ 1.24
EMC3Q9P0I2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
EMC3Q9P0I2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
EMC3Q9P0I2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
EMC3Q9P0I2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.77■■□□□ 1.24
EMC3Q9P0I2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
EMC3Q9P0I2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.76■■□□□ 1.23
EMC3Q9P0I2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
EMC3Q9P0I2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
EMC3Q9P0I2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.76■■□□□ 1.23
EMC3Q9P0I2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
EMC3Q9P0I2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.75■■□□□ 1.23
EMC3Q9P0I2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
EMC3Q9P0I2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
EMC3Q9P0I2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
EMC3Q9P0I2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.74■■□□□ 1.23
EMC3Q9P0I2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
EMC3Q9P0I2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
EMC3Q9P0I2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
EMC3Q9P0I2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
EMC3Q9P0I2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
EMC3Q9P0I2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
EMC3Q9P0I2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.72■■□□□ 1.23
EMC3Q9P0I2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
EMC3Q9P0I2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
EMC3Q9P0I2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.72■■□□□ 1.23
EMC3Q9P0I2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
EMC3Q9P0I2 MIR3648-2-201ENST00000581792 180 ntBASIC22.72■■□□□ 1.23
EMC3Q9P0I2 MIR3648-1-201ENST00000615959 180 ntBASIC22.72■■□□□ 1.23
EMC3Q9P0I2 AC135731.1-201ENST00000569415 2548 ntBASIC22.72■■□□□ 1.23
EMC3Q9P0I2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.71■■□□□ 1.23
EMC3Q9P0I2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.71■■□□□ 1.23
EMC3Q9P0I2 CR559946.2-201ENST00000623684 991 ntBASIC22.71■■□□□ 1.23
EMC3Q9P0I2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.71■■□□□ 1.23
EMC3Q9P0I2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
EMC3Q9P0I2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.71■■□□□ 1.23
EMC3Q9P0I2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
EMC3Q9P0I2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.7■■□□□ 1.22
EMC3Q9P0I2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.7■■□□□ 1.22
EMC3Q9P0I2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
EMC3Q9P0I2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
EMC3Q9P0I2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
EMC3Q9P0I2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.69■■□□□ 1.22
EMC3Q9P0I2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
EMC3Q9P0I2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EMC3Q9P0I2 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.69■■□□□ 1.22
EMC3Q9P0I2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
EMC3Q9P0I2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.68■■□□□ 1.22
EMC3Q9P0I2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.68■■□□□ 1.22
EMC3Q9P0I2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EMC3Q9P0I2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.67■■□□□ 1.22
EMC3Q9P0I2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EMC3Q9P0I2 AC100797.4-201ENST00000631653 1827 ntBASIC22.67■■□□□ 1.22
EMC3Q9P0I2 AC110285.7-201ENST00000624417 1536 ntBASIC22.67■■□□□ 1.22
EMC3Q9P0I2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
EMC3Q9P0I2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms