Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.62■■□□□ 1.05
GCM1Q9NP62 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
GCM1Q9NP62 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GCM1Q9NP62 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 CR559946.2-201ENST00000623684 991 ntBASIC21.61■■□□□ 1.05
GCM1Q9NP62 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GCM1Q9NP62 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GCM1Q9NP62 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GCM1Q9NP62 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
GCM1Q9NP62 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.6■■□□□ 1.05
GCM1Q9NP62 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
GCM1Q9NP62 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.59■■□□□ 1.05
GCM1Q9NP62 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GCM1Q9NP62 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.59■■□□□ 1.05
GCM1Q9NP62 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.59■■□□□ 1.05
GCM1Q9NP62 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GCM1Q9NP62 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GCM1Q9NP62 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.58■■□□□ 1.05
GCM1Q9NP62 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
GCM1Q9NP62 AC016575.1-201ENST00000607026 382 ntBASIC21.58■■□□□ 1.05
GCM1Q9NP62 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.58■■□□□ 1.04
GCM1Q9NP62 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GCM1Q9NP62 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.57■■□□□ 1.04
GCM1Q9NP62 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
GCM1Q9NP62 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.56■■□□□ 1.04
GCM1Q9NP62 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCM1Q9NP62 AC110285.7-201ENST00000624417 1536 ntBASIC21.55■■□□□ 1.04
GCM1Q9NP62 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.55■■□□□ 1.04
GCM1Q9NP62 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCM1Q9NP62 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.55■■□□□ 1.04
GCM1Q9NP62 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GCM1Q9NP62 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
GCM1Q9NP62 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.54■■□□□ 1.04
GCM1Q9NP62 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCM1Q9NP62 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCM1Q9NP62 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCM1Q9NP62 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GCM1Q9NP62 HLA-V-202ENST00000446817 847 ntBASIC21.52■■□□□ 1.04
GCM1Q9NP62 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GCM1Q9NP62 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GCM1Q9NP62 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GCM1Q9NP62 MIR639-201ENST00000384974 98 ntBASIC21.49■■□□□ 1.03
GCM1Q9NP62 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GCM1Q9NP62 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.48■■□□□ 1.03
GCM1Q9NP62 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
GCM1Q9NP62 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCM1Q9NP62 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCM1Q9NP62 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
GCM1Q9NP62 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCM1Q9NP62 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.47■■□□□ 1.03
GCM1Q9NP62 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.46■■□□□ 1.03
GCM1Q9NP62 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
GCM1Q9NP62 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
GCM1Q9NP62 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
GCM1Q9NP62 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.44■■□□□ 1.02
GCM1Q9NP62 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.44■■□□□ 1.02
GCM1Q9NP62 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GCM1Q9NP62 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GCM1Q9NP62 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GCM1Q9NP62 AC008813.1-201ENST00000536597 885 ntBASIC21.42■■□□□ 1.02
GCM1Q9NP62 AP002414.2-202ENST00000590929 1450 ntBASIC21.42■■□□□ 1.02
GCM1Q9NP62 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GCM1Q9NP62 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 283.6 ms