Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.62■■□□□ 1.05
GCM1Q9NP62 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
GCM1Q9NP62 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GCM1Q9NP62 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.61■■□□□ 1.05
GCM1Q9NP62 CR559946.2-201ENST00000623684 991 ntBASIC21.61■■□□□ 1.05
GCM1Q9NP62 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GCM1Q9NP62 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GCM1Q9NP62 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GCM1Q9NP62 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
GCM1Q9NP62 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.6■■□□□ 1.05
GCM1Q9NP62 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
GCM1Q9NP62 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.59■■□□□ 1.05
GCM1Q9NP62 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GCM1Q9NP62 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.59■■□□□ 1.05
GCM1Q9NP62 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.59■■□□□ 1.05
GCM1Q9NP62 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GCM1Q9NP62 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GCM1Q9NP62 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.58■■□□□ 1.05
GCM1Q9NP62 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
GCM1Q9NP62 AC016575.1-201ENST00000607026 382 ntBASIC21.58■■□□□ 1.05
GCM1Q9NP62 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.58■■□□□ 1.04
GCM1Q9NP62 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GCM1Q9NP62 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.57■■□□□ 1.04
GCM1Q9NP62 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
GCM1Q9NP62 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.56■■□□□ 1.04
GCM1Q9NP62 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GCM1Q9NP62 AC110285.7-201ENST00000624417 1536 ntBASIC21.55■■□□□ 1.04
GCM1Q9NP62 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.55■■□□□ 1.04
GCM1Q9NP62 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GCM1Q9NP62 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.55■■□□□ 1.04
GCM1Q9NP62 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GCM1Q9NP62 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
GCM1Q9NP62 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.54■■□□□ 1.04
GCM1Q9NP62 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCM1Q9NP62 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCM1Q9NP62 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GCM1Q9NP62 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GCM1Q9NP62 HLA-V-202ENST00000446817 847 ntBASIC21.52■■□□□ 1.04
GCM1Q9NP62 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GCM1Q9NP62 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GCM1Q9NP62 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
GCM1Q9NP62 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GCM1Q9NP62 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.5■■□□□ 1.03
GCM1Q9NP62 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GCM1Q9NP62 MIR639-201ENST00000384974 98 ntBASIC21.49■■□□□ 1.03
GCM1Q9NP62 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GCM1Q9NP62 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.48■■□□□ 1.03
GCM1Q9NP62 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
GCM1Q9NP62 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCM1Q9NP62 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCM1Q9NP62 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
GCM1Q9NP62 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCM1Q9NP62 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.47■■□□□ 1.03
GCM1Q9NP62 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.46■■□□□ 1.03
GCM1Q9NP62 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
GCM1Q9NP62 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCM1Q9NP62 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
GCM1Q9NP62 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GCM1Q9NP62 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
GCM1Q9NP62 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.44■■□□□ 1.02
GCM1Q9NP62 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.44■■□□□ 1.02
GCM1Q9NP62 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GCM1Q9NP62 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GCM1Q9NP62 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GCM1Q9NP62 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GCM1Q9NP62 AC008813.1-201ENST00000536597 885 ntBASIC21.42■■□□□ 1.02
GCM1Q9NP62 AP002414.2-202ENST00000590929 1450 ntBASIC21.42■■□□□ 1.02
GCM1Q9NP62 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GCM1Q9NP62 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms