Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP1R3EQ9H7J1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP1R3EQ9H7J1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP1R3EQ9H7J1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.39■■□□□ 1.17
PPP1R3EQ9H7J1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP1R3EQ9H7J1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP1R3EQ9H7J1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP1R3EQ9H7J1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 AC005559.1-201ENST00000589661 871 ntBASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.36■■□□□ 1.17
PPP1R3EQ9H7J1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.35■■□□□ 1.17
PPP1R3EQ9H7J1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PPP1R3EQ9H7J1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.35■■□□□ 1.17
PPP1R3EQ9H7J1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.35■■□□□ 1.17
PPP1R3EQ9H7J1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PPP1R3EQ9H7J1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PPP1R3EQ9H7J1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.34■■□□□ 1.17
PPP1R3EQ9H7J1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PPP1R3EQ9H7J1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PPP1R3EQ9H7J1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP1R3EQ9H7J1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.33■■□□□ 1.17
PPP1R3EQ9H7J1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PPP1R3EQ9H7J1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PPP1R3EQ9H7J1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PPP1R3EQ9H7J1 DUX4L28-201ENST00000623687 678 ntBASIC22.33■■□□□ 1.17
PPP1R3EQ9H7J1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
PPP1R3EQ9H7J1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP1R3EQ9H7J1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP1R3EQ9H7J1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PPP1R3EQ9H7J1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP1R3EQ9H7J1 AC127502.1-201ENST00000399971 1502 ntBASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPP1R3EQ9H7J1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PPP1R3EQ9H7J1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP1R3EQ9H7J1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 LINC01003-201ENST00000564834 1764 ntBASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
PPP1R3EQ9H7J1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 AC091060.1-201ENST00000623524 1766 ntBASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP1R3EQ9H7J1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP1R3EQ9H7J1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.27■■□□□ 1.16
PPP1R3EQ9H7J1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.27■■□□□ 1.16
PPP1R3EQ9H7J1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP1R3EQ9H7J1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
PPP1R3EQ9H7J1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.25■■□□□ 1.15
PPP1R3EQ9H7J1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPP1R3EQ9H7J1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.25■■□□□ 1.15
PPP1R3EQ9H7J1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPP1R3EQ9H7J1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPP1R3EQ9H7J1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.25■■□□□ 1.15
PPP1R3EQ9H7J1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPP1R3EQ9H7J1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPP1R3EQ9H7J1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.24■■□□□ 1.15
PPP1R3EQ9H7J1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PPP1R3EQ9H7J1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.24■■□□□ 1.15
PPP1R3EQ9H7J1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.23■■□□□ 1.15
PPP1R3EQ9H7J1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PPP1R3EQ9H7J1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPP1R3EQ9H7J1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPP1R3EQ9H7J1 AC020928.2-201ENST00000588717 2197 ntBASIC22.22■■□□□ 1.15
PPP1R3EQ9H7J1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
PPP1R3EQ9H7J1 MIR6090-201ENST00000622481 60 ntBASIC22.22■■□□□ 1.15
PPP1R3EQ9H7J1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP1R3EQ9H7J1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms