Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC39■■■■□ 3.83
PTPN23Q9H3S7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
PTPN23Q9H3S7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC39■■■■□ 3.83
PTPN23Q9H3S7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
PTPN23Q9H3S7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC38.99■■■■□ 3.83
PTPN23Q9H3S7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
PTPN23Q9H3S7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
PTPN23Q9H3S7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC38.98■■■■□ 3.83
PTPN23Q9H3S7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC38.98■■■■□ 3.83
PTPN23Q9H3S7 AP004833.2-201ENST00000532228 1454 ntBASIC38.98■■■■□ 3.83
PTPN23Q9H3S7 RARRES2P2-201ENST00000394842 485 ntBASIC38.97■■■■□ 3.83
PTPN23Q9H3S7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
PTPN23Q9H3S7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC38.97■■■■□ 3.83
PTPN23Q9H3S7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC38.97■■■■□ 3.83
PTPN23Q9H3S7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
PTPN23Q9H3S7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
PTPN23Q9H3S7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC38.96■■■■□ 3.83
PTPN23Q9H3S7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
PTPN23Q9H3S7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC38.95■■■■□ 3.83
PTPN23Q9H3S7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
PTPN23Q9H3S7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC38.94■■■■□ 3.82
PTPN23Q9H3S7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
PTPN23Q9H3S7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC38.93■■■■□ 3.82
PTPN23Q9H3S7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
PTPN23Q9H3S7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC38.93■■■■□ 3.82
PTPN23Q9H3S7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC38.92■■■■□ 3.82
PTPN23Q9H3S7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC38.91■■■■□ 3.82
PTPN23Q9H3S7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC38.9■■■■□ 3.82
PTPN23Q9H3S7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
PTPN23Q9H3S7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC38.89■■■■□ 3.82
PTPN23Q9H3S7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
PTPN23Q9H3S7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC38.87■■■■□ 3.81
PTPN23Q9H3S7 AC100797.4-201ENST00000631653 1827 ntBASIC38.87■■■■□ 3.81
PTPN23Q9H3S7 MIR219A2-201ENST00000608502 1504 ntBASIC38.87■■■■□ 3.81
PTPN23Q9H3S7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
PTPN23Q9H3S7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC38.86■■■■□ 3.81
PTPN23Q9H3S7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC38.86■■■■□ 3.81
PTPN23Q9H3S7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC38.85■■■■□ 3.81
PTPN23Q9H3S7 AC060814.1-201ENST00000554326 538 ntBASIC38.85■■■■□ 3.81
PTPN23Q9H3S7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC38.85■■■■□ 3.81
PTPN23Q9H3S7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
PTPN23Q9H3S7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
PTPN23Q9H3S7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
PTPN23Q9H3S7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC38.83■■■■□ 3.81
PTPN23Q9H3S7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC38.82■■■■□ 3.81
PTPN23Q9H3S7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
PTPN23Q9H3S7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC38.82■■■■□ 3.8
PTPN23Q9H3S7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC38.81■■■■□ 3.8
PTPN23Q9H3S7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC38.81■■■■□ 3.8
PTPN23Q9H3S7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC38.81■■■■□ 3.8
PTPN23Q9H3S7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC38.8■■■■□ 3.8
PTPN23Q9H3S7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC38.8■■■■□ 3.8
PTPN23Q9H3S7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC38.78■■■■□ 3.8
PTPN23Q9H3S7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC38.78■■■■□ 3.8
PTPN23Q9H3S7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC38.77■■■■□ 3.8
PTPN23Q9H3S7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
PTPN23Q9H3S7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
PTPN23Q9H3S7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC38.77■■■■□ 3.8
PTPN23Q9H3S7 ABHD17AP5-201ENST00000580133 923 ntBASIC38.77■■■■□ 3.8
PTPN23Q9H3S7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC38.77■■■■□ 3.8
PTPN23Q9H3S7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC38.77■■■■□ 3.8
PTPN23Q9H3S7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
PTPN23Q9H3S7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.76■■■■□ 3.8
PTPN23Q9H3S7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC38.75■■■■□ 3.79
PTPN23Q9H3S7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
PTPN23Q9H3S7 RNF126P1-201ENST00000567452 1320 ntBASIC38.75■■■■□ 3.79
PTPN23Q9H3S7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.75■■■■□ 3.79
PTPN23Q9H3S7 AL139393.2-201ENST00000608721 2025 ntBASIC38.74■■■■□ 3.79
PTPN23Q9H3S7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC38.74■■■■□ 3.79
PTPN23Q9H3S7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
PTPN23Q9H3S7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC38.73■■■■□ 3.79
PTPN23Q9H3S7 AC022413.1-201ENST00000624602 984 ntBASIC38.73■■■■□ 3.79
PTPN23Q9H3S7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC38.72■■■■□ 3.79
PTPN23Q9H3S7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
PTPN23Q9H3S7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
PTPN23Q9H3S7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC38.71■■■■□ 3.79
PTPN23Q9H3S7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
PTPN23Q9H3S7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
PTPN23Q9H3S7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
PTPN23Q9H3S7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
PTPN23Q9H3S7 AC092296.2-201ENST00000589470 999 ntBASIC38.68■■■■□ 3.78
PTPN23Q9H3S7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC38.68■■■■□ 3.78
PTPN23Q9H3S7 MED25-210ENST00000612854 801 ntTSL 5 BASIC38.67■■■■□ 3.78
PTPN23Q9H3S7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
PTPN23Q9H3S7 MED25-214ENST00000622402 642 ntTSL 5 BASIC38.67■■■■□ 3.78
PTPN23Q9H3S7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC38.67■■■■□ 3.78
PTPN23Q9H3S7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
PTPN23Q9H3S7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
PTPN23Q9H3S7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
PTPN23Q9H3S7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC38.65■■■■□ 3.78
PTPN23Q9H3S7 ABCB10P1-201ENST00000614297 2181 ntBASIC38.65■■■■□ 3.78
PTPN23Q9H3S7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC38.65■■■■□ 3.78
PTPN23Q9H3S7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
PTPN23Q9H3S7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC38.64■■■■□ 3.78
PTPN23Q9H3S7 AL157400.5-201ENST00000507624 621 ntBASIC38.63■■■■□ 3.78
PTPN23Q9H3S7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC38.63■■■■□ 3.78
PTPN23Q9H3S7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC38.63■■■■□ 3.77
PTPN23Q9H3S7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC38.63■■■■□ 3.77
PTPN23Q9H3S7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.62■■■■□ 3.77
PTPN23Q9H3S7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms