Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 AL139393.2-201ENST00000608721 2025 ntBASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
KRTAP4-3Q9BYR4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 GPX1-201ENST00000419349 1106 ntBASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 ABCB10P3-201ENST00000561950 2166 ntBASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC8.69□□□□□ -1.02
KRTAP4-3Q9BYR4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
KRTAP4-3Q9BYR4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-3Q9BYR4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-3Q9BYR4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 AC022413.1-201ENST00000624602 984 ntBASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC8.65□□□□□ -1.02
KRTAP4-3Q9BYR4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP4-3Q9BYR4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP4-3Q9BYR4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
KRTAP4-3Q9BYR4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 RARRES2P2-201ENST00000394842 485 ntBASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 MED25-210ENST00000612854 801 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 MED25-214ENST00000622402 642 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 MIR219A2-201ENST00000608502 1504 ntBASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
KRTAP4-3Q9BYR4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC8.63□□□□□ -1.03
KRTAP4-3Q9BYR4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 1286.6 ms