Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF5Q99942 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RNF5Q99942 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF5Q99942 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF5Q99942 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF5Q99942 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF5Q99942 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF5Q99942 BX255925.1-201ENST00000566954 1854 ntBASIC20.35■□□□□ 0.85
RNF5Q99942 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF5Q99942 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF5Q99942 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RNF5Q99942 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF5Q99942 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF5Q99942 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF5Q99942 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF5Q99942 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF5Q99942 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF5Q99942 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF5Q99942 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF5Q99942 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF5Q99942 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF5Q99942 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RNF5Q99942 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF5Q99942 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF5Q99942 AC018358.1-201ENST00000631079 1402 ntBASIC20.31■□□□□ 0.84
RNF5Q99942 LINC01971-201ENST00000617888 1048 ntBASIC20.31■□□□□ 0.84
RNF5Q99942 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF5Q99942 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF5Q99942 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF5Q99942 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF5Q99942 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF5Q99942 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF5Q99942 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF5Q99942 LINC01003-201ENST00000564834 1764 ntBASIC20.3■□□□□ 0.84
RNF5Q99942 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF5Q99942 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF5Q99942 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF5Q99942 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF5Q99942 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RNF5Q99942 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF5Q99942 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF5Q99942 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF5Q99942 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF5Q99942 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF5Q99942 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF5Q99942 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF5Q99942 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF5Q99942 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF5Q99942 AC110285.7-201ENST00000624417 1536 ntBASIC20.27■□□□□ 0.83
RNF5Q99942 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF5Q99942 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF5Q99942 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF5Q99942 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF5Q99942 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF5Q99942 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF5Q99942 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF5Q99942 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF5Q99942 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RNF5Q99942 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RNF5Q99942 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF5Q99942 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF5Q99942 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RNF5Q99942 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF5Q99942 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF5Q99942 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF5Q99942 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF5Q99942 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.23■□□□□ 0.83
RNF5Q99942 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF5Q99942 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF5Q99942 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF5Q99942 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF5Q99942 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF5Q99942 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF5Q99942 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF5Q99942 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF5Q99942 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RNF5Q99942 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF5Q99942 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF5Q99942 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L13-201ENST00000554103 1267 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L15-201ENST00000611059 1267 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L23-201ENST00000615195 1269 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L24-201ENST00000617576 1269 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L22-201ENST00000618238 1269 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L20-201ENST00000619712 1269 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L21-201ENST00000622058 1269 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L10-201ENST00000622460 1267 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 DUX4L25-201ENST00000624915 1269 ntBASIC20.2■□□□□ 0.82
RNF5Q99942 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF5Q99942 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF5Q99942 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF5Q99942 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF5Q99942 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF5Q99942 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF5Q99942 ZNRF2P2-203ENST00000454624 420 ntBASIC20.19■□□□□ 0.82
RNF5Q99942 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF5Q99942 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF5Q99942 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF5Q99942 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF5Q99942 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms