Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.32■■■□□ 2.6
EYA3Q99504 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
EYA3Q99504 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.31■■■□□ 2.6
EYA3Q99504 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.31■■■□□ 2.6
EYA3Q99504 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
EYA3Q99504 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
EYA3Q99504 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
EYA3Q99504 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
EYA3Q99504 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
EYA3Q99504 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.28■■■□□ 2.6
EYA3Q99504 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.28■■■□□ 2.6
EYA3Q99504 AL033527.3-201ENST00000566366 1196 ntBASIC31.28■■■□□ 2.6
EYA3Q99504 AC018358.1-201ENST00000631079 1402 ntBASIC31.27■■■□□ 2.6
EYA3Q99504 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
EYA3Q99504 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
EYA3Q99504 AC092296.2-201ENST00000589470 999 ntBASIC31.27■■■□□ 2.6
EYA3Q99504 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
EYA3Q99504 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
EYA3Q99504 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
EYA3Q99504 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.26■■■□□ 2.59
EYA3Q99504 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
EYA3Q99504 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
EYA3Q99504 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
EYA3Q99504 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
EYA3Q99504 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
EYA3Q99504 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
EYA3Q99504 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.25■■■□□ 2.59
EYA3Q99504 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
EYA3Q99504 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
EYA3Q99504 AC126177.7-201ENST00000547904 679 ntBASIC31.23■■■□□ 2.59
EYA3Q99504 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
EYA3Q99504 ECEL1P2-201ENST00000461596 1295 ntBASIC31.22■■■□□ 2.59
EYA3Q99504 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.22■■■□□ 2.59
EYA3Q99504 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
EYA3Q99504 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
EYA3Q99504 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
EYA3Q99504 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.2■■■□□ 2.59
EYA3Q99504 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.2■■■□□ 2.58
EYA3Q99504 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
EYA3Q99504 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
EYA3Q99504 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
EYA3Q99504 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
EYA3Q99504 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
EYA3Q99504 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
EYA3Q99504 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
EYA3Q99504 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
EYA3Q99504 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
EYA3Q99504 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
EYA3Q99504 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
EYA3Q99504 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
EYA3Q99504 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.15■■■□□ 2.58
EYA3Q99504 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
EYA3Q99504 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.15■■■□□ 2.58
EYA3Q99504 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
EYA3Q99504 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.14■■■□□ 2.58
EYA3Q99504 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
EYA3Q99504 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
EYA3Q99504 KRT18P60-201ENST00000312876 1297 ntBASIC31.13■■■□□ 2.57
EYA3Q99504 TSPY13P-201ENST00000338964 914 ntBASIC31.13■■■□□ 2.57
EYA3Q99504 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
EYA3Q99504 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
EYA3Q99504 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
EYA3Q99504 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
EYA3Q99504 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.11■■■□□ 2.57
EYA3Q99504 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.1■■■□□ 2.57
EYA3Q99504 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
EYA3Q99504 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.1■■■□□ 2.57
EYA3Q99504 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
EYA3Q99504 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
EYA3Q99504 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.1■■■□□ 2.57
EYA3Q99504 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
EYA3Q99504 AC004987.1-201ENST00000428627 508 ntBASIC31.09■■■□□ 2.57
EYA3Q99504 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
EYA3Q99504 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.08■■■□□ 2.57
EYA3Q99504 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.08■■■□□ 2.57
EYA3Q99504 ATP5G2P3-201ENST00000429083 425 ntBASIC31.08■■■□□ 2.57
EYA3Q99504 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
EYA3Q99504 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
EYA3Q99504 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
EYA3Q99504 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.07■■■□□ 2.56
EYA3Q99504 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
EYA3Q99504 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
EYA3Q99504 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
EYA3Q99504 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.06■■■□□ 2.56
EYA3Q99504 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
EYA3Q99504 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
EYA3Q99504 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
EYA3Q99504 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
EYA3Q99504 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.04■■■□□ 2.56
EYA3Q99504 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
EYA3Q99504 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
EYA3Q99504 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.03■■■□□ 2.56
EYA3Q99504 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
EYA3Q99504 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.02■■■□□ 2.56
EYA3Q99504 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.02■■■□□ 2.56
EYA3Q99504 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
EYA3Q99504 AL157400.5-201ENST00000507624 621 ntBASIC31.02■■■□□ 2.56
EYA3Q99504 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
EYA3Q99504 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
EYA3Q99504 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.01■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 684.1 ms