Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.47■■■□□ 2.47
CDK5RAP2Q96SN8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 AC100797.4-201ENST00000631653 1827 ntBASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDK5RAP2Q96SN8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDK5RAP2Q96SN8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDK5RAP2Q96SN8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.44■■■□□ 2.46
CDK5RAP2Q96SN8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDK5RAP2Q96SN8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
CDK5RAP2Q96SN8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDK5RAP2Q96SN8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CDK5RAP2Q96SN8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDK5RAP2Q96SN8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDK5RAP2Q96SN8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.42■■■□□ 2.46
CDK5RAP2Q96SN8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDK5RAP2Q96SN8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.42■■■□□ 2.46
CDK5RAP2Q96SN8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.42■■■□□ 2.46
CDK5RAP2Q96SN8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDK5RAP2Q96SN8 AC060814.1-201ENST00000554326 538 ntBASIC30.41■■■□□ 2.46
CDK5RAP2Q96SN8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.4■■■□□ 2.46
CDK5RAP2Q96SN8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDK5RAP2Q96SN8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.4■■■□□ 2.46
CDK5RAP2Q96SN8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK5RAP2Q96SN8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CDK5RAP2Q96SN8 AP004833.2-201ENST00000532228 1454 ntBASIC30.39■■■□□ 2.46
CDK5RAP2Q96SN8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.39■■■□□ 2.45
CDK5RAP2Q96SN8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDK5RAP2Q96SN8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK5RAP2Q96SN8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.38■■■□□ 2.45
CDK5RAP2Q96SN8 RARRES2P2-201ENST00000394842 485 ntBASIC30.38■■■□□ 2.45
CDK5RAP2Q96SN8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.38■■■□□ 2.45
CDK5RAP2Q96SN8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CDK5RAP2Q96SN8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
CDK5RAP2Q96SN8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
CDK5RAP2Q96SN8 ABCB10P1-201ENST00000614297 2181 ntBASIC30.36■■■□□ 2.45
CDK5RAP2Q96SN8 MIR219A2-201ENST00000608502 1504 ntBASIC30.36■■■□□ 2.45
CDK5RAP2Q96SN8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDK5RAP2Q96SN8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CDK5RAP2Q96SN8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDK5RAP2Q96SN8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK5RAP2Q96SN8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.34■■■□□ 2.45
CDK5RAP2Q96SN8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.34■■■□□ 2.45
CDK5RAP2Q96SN8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDK5RAP2Q96SN8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK5RAP2Q96SN8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.33■■■□□ 2.45
CDK5RAP2Q96SN8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDK5RAP2Q96SN8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.33■■■□□ 2.45
CDK5RAP2Q96SN8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.32■■■□□ 2.44
CDK5RAP2Q96SN8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDK5RAP2Q96SN8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.31■■■□□ 2.44
CDK5RAP2Q96SN8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDK5RAP2Q96SN8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CDK5RAP2Q96SN8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDK5RAP2Q96SN8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDK5RAP2Q96SN8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.3■■■□□ 2.44
CDK5RAP2Q96SN8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.29■■■□□ 2.44
CDK5RAP2Q96SN8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.29■■■□□ 2.44
CDK5RAP2Q96SN8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDK5RAP2Q96SN8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 AC092296.2-201ENST00000589470 999 ntBASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 AL139393.2-201ENST00000608721 2025 ntBASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDK5RAP2Q96SN8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.27■■■□□ 2.44
CDK5RAP2Q96SN8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDK5RAP2Q96SN8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDK5RAP2Q96SN8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CDK5RAP2Q96SN8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDK5RAP2Q96SN8 ABCB10P3-201ENST00000561950 2166 ntBASIC30.26■■■□□ 2.44
CDK5RAP2Q96SN8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.26■■■□□ 2.43
CDK5RAP2Q96SN8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.26■■■□□ 2.43
CDK5RAP2Q96SN8 ABHD17AP5-201ENST00000580133 923 ntBASIC30.26■■■□□ 2.43
CDK5RAP2Q96SN8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.26■■■□□ 2.43
CDK5RAP2Q96SN8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDK5RAP2Q96SN8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDK5RAP2Q96SN8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDK5RAP2Q96SN8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
CDK5RAP2Q96SN8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CDK5RAP2Q96SN8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CDK5RAP2Q96SN8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CDK5RAP2Q96SN8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
CDK5RAP2Q96SN8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDK5RAP2Q96SN8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.24■■■□□ 2.43
CDK5RAP2Q96SN8 AL157400.5-201ENST00000507624 621 ntBASIC30.23■■■□□ 2.43
CDK5RAP2Q96SN8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.23■■■□□ 2.43
CDK5RAP2Q96SN8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.22■■■□□ 2.43
CDK5RAP2Q96SN8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDK5RAP2Q96SN8 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.21■■■□□ 2.43
CDK5RAP2Q96SN8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CDK5RAP2Q96SN8 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.21■■■□□ 2.43
CDK5RAP2Q96SN8 AC022413.1-201ENST00000624602 984 ntBASIC30.21■■■□□ 2.43
CDK5RAP2Q96SN8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms