Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
HAPLN3Q96S86 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.37■■□□□ 1.81
HAPLN3Q96S86 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
HAPLN3Q96S86 AC110285.7-201ENST00000624417 1536 ntBASIC26.37■■□□□ 1.81
HAPLN3Q96S86 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 DRD5P2-201ENST00000421395 2012 ntBASIC26.35■■□□□ 1.81
HAPLN3Q96S86 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.35■■□□□ 1.81
HAPLN3Q96S86 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HAPLN3Q96S86 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HAPLN3Q96S86 MIR3648-2-201ENST00000581792 180 ntBASIC26.34■■□□□ 1.81
HAPLN3Q96S86 MIR3648-1-201ENST00000615959 180 ntBASIC26.34■■□□□ 1.81
HAPLN3Q96S86 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HAPLN3Q96S86 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.33■■□□□ 1.81
HAPLN3Q96S86 CR559946.2-201ENST00000623684 991 ntBASIC26.33■■□□□ 1.81
HAPLN3Q96S86 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.33■■□□□ 1.81
HAPLN3Q96S86 AP002414.2-202ENST00000590929 1450 ntBASIC26.32■■□□□ 1.8
HAPLN3Q96S86 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
HAPLN3Q96S86 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.32■■□□□ 1.8
HAPLN3Q96S86 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.32■■□□□ 1.8
HAPLN3Q96S86 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
HAPLN3Q96S86 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HAPLN3Q96S86 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.29■■□□□ 1.8
HAPLN3Q96S86 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HAPLN3Q96S86 AC016575.1-201ENST00000607026 382 ntBASIC26.26■■□□□ 1.79
HAPLN3Q96S86 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HAPLN3Q96S86 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.24■■□□□ 1.79
HAPLN3Q96S86 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.24■■□□□ 1.79
HAPLN3Q96S86 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
HAPLN3Q96S86 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HAPLN3Q96S86 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.21■■□□□ 1.79
HAPLN3Q96S86 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HAPLN3Q96S86 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
HAPLN3Q96S86 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
HAPLN3Q96S86 AC008813.1-201ENST00000536597 885 ntBASIC26.19■■□□□ 1.78
HAPLN3Q96S86 AC142086.6-201ENST00000621154 1765 ntBASIC26.19■■□□□ 1.78
HAPLN3Q96S86 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HAPLN3Q96S86 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
HAPLN3Q96S86 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.18■■□□□ 1.78
HAPLN3Q96S86 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
HAPLN3Q96S86 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
HAPLN3Q96S86 MIR639-201ENST00000384974 98 ntBASIC26.16■■□□□ 1.78
HAPLN3Q96S86 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
HAPLN3Q96S86 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms