Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM56Q96MV1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM56Q96MV1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM56Q96MV1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM56Q96MV1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TMEM56Q96MV1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TMEM56Q96MV1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM56Q96MV1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM56Q96MV1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TMEM56Q96MV1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM56Q96MV1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM56Q96MV1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TMEM56Q96MV1 AP002414.2-202ENST00000590929 1450 ntBASIC20.8■□□□□ 0.92
TMEM56Q96MV1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM56Q96MV1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM56Q96MV1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM56Q96MV1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM56Q96MV1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM56Q96MV1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM56Q96MV1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM56Q96MV1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TMEM56Q96MV1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM56Q96MV1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM56Q96MV1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM56Q96MV1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM56Q96MV1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM56Q96MV1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.77■□□□□ 0.92
TMEM56Q96MV1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.77■□□□□ 0.92
TMEM56Q96MV1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM56Q96MV1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM56Q96MV1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM56Q96MV1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM56Q96MV1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56Q96MV1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM56Q96MV1 AC091060.1-201ENST00000623524 1766 ntBASIC20.74■□□□□ 0.91
TMEM56Q96MV1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM56Q96MV1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM56Q96MV1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TMEM56Q96MV1 AL391121.1-201ENST00000607967 1349 ntBASIC20.74■□□□□ 0.91
TMEM56Q96MV1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM56Q96MV1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM56Q96MV1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM56Q96MV1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM56Q96MV1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM56Q96MV1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM56Q96MV1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM56Q96MV1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM56Q96MV1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.71■□□□□ 0.91
TMEM56Q96MV1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM56Q96MV1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM56Q96MV1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM56Q96MV1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM56Q96MV1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM56Q96MV1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM56Q96MV1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM56Q96MV1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM56Q96MV1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM56Q96MV1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TMEM56Q96MV1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM56Q96MV1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM56Q96MV1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TMEM56Q96MV1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56Q96MV1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56Q96MV1 AC097358.2-201ENST00000607541 1159 ntBASIC20.67■□□□□ 0.9
TMEM56Q96MV1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56Q96MV1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56Q96MV1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM56Q96MV1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM56Q96MV1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM56Q96MV1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 AC018358.1-201ENST00000631079 1402 ntBASIC20.65■□□□□ 0.9
TMEM56Q96MV1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56Q96MV1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TMEM56Q96MV1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM56Q96MV1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TMEM56Q96MV1 AC145676.1-201ENST00000514988 2004 ntBASIC20.64■□□□□ 0.89
TMEM56Q96MV1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM56Q96MV1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM56Q96MV1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM56Q96MV1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TMEM56Q96MV1 CAHM-201ENST00000604200 896 ntBASIC20.63■□□□□ 0.89
TMEM56Q96MV1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM56Q96MV1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM56Q96MV1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM56Q96MV1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM56Q96MV1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM56Q96MV1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms