Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V0A1Q93050 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V0A1Q93050 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V0A1Q93050 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ATP6V0A1Q93050 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.64■■■□□ 2.18
ATP6V0A1Q93050 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V0A1Q93050 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V0A1Q93050 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
ATP6V0A1Q93050 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V0A1Q93050 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V0A1Q93050 RARRES2P2-201ENST00000394842 485 ntBASIC28.62■■■□□ 2.17
ATP6V0A1Q93050 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.62■■■□□ 2.17
ATP6V0A1Q93050 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V0A1Q93050 AC110285.7-201ENST00000624417 1536 ntBASIC28.61■■■□□ 2.17
ATP6V0A1Q93050 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.6■■■□□ 2.17
ATP6V0A1Q93050 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
ATP6V0A1Q93050 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.6■■■□□ 2.17
ATP6V0A1Q93050 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.59■■■□□ 2.17
ATP6V0A1Q93050 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.59■■■□□ 2.17
ATP6V0A1Q93050 AC008813.1-201ENST00000536597 885 ntBASIC28.59■■■□□ 2.17
ATP6V0A1Q93050 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.59■■■□□ 2.17
ATP6V0A1Q93050 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
ATP6V0A1Q93050 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ATP6V0A1Q93050 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.57■■■□□ 2.16
ATP6V0A1Q93050 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.57■■■□□ 2.16
ATP6V0A1Q93050 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
ATP6V0A1Q93050 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
ATP6V0A1Q93050 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
ATP6V0A1Q93050 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ATP6V0A1Q93050 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.56■■■□□ 2.16
ATP6V0A1Q93050 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
ATP6V0A1Q93050 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.55■■■□□ 2.16
ATP6V0A1Q93050 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ATP6V0A1Q93050 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ATP6V0A1Q93050 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
ATP6V0A1Q93050 RNF126P1-201ENST00000567452 1320 ntBASIC28.54■■■□□ 2.16
ATP6V0A1Q93050 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.54■■■□□ 2.16
ATP6V0A1Q93050 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ATP6V0A1Q93050 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.53■■■□□ 2.16
ATP6V0A1Q93050 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.53■■■□□ 2.16
ATP6V0A1Q93050 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
ATP6V0A1Q93050 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.52■■■□□ 2.16
ATP6V0A1Q93050 AC100797.4-201ENST00000631653 1827 ntBASIC28.52■■■□□ 2.16
ATP6V0A1Q93050 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.52■■■□□ 2.16
ATP6V0A1Q93050 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.52■■■□□ 2.16
ATP6V0A1Q93050 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
ATP6V0A1Q93050 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
ATP6V0A1Q93050 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.51■■■□□ 2.15
ATP6V0A1Q93050 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ATP6V0A1Q93050 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 ABHD17AP5-201ENST00000580133 923 ntBASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 AC022413.1-201ENST00000624602 984 ntBASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
ATP6V0A1Q93050 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ATP6V0A1Q93050 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ATP6V0A1Q93050 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
ATP6V0A1Q93050 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ATP6V0A1Q93050 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ATP6V0A1Q93050 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.48■■■□□ 2.15
ATP6V0A1Q93050 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ATP6V0A1Q93050 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
ATP6V0A1Q93050 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ATP6V0A1Q93050 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ATP6V0A1Q93050 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
ATP6V0A1Q93050 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ATP6V0A1Q93050 ABCB10P3-201ENST00000561950 2166 ntBASIC28.47■■■□□ 2.15
ATP6V0A1Q93050 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.46■■■□□ 2.15
ATP6V0A1Q93050 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ATP6V0A1Q93050 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
ATP6V0A1Q93050 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.15
ATP6V0A1Q93050 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.45■■■□□ 2.14
ATP6V0A1Q93050 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
ATP6V0A1Q93050 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ATP6V0A1Q93050 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ATP6V0A1Q93050 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.44■■■□□ 2.14
ATP6V0A1Q93050 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
ATP6V0A1Q93050 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ATP6V0A1Q93050 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ATP6V0A1Q93050 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.43■■■□□ 2.14
ATP6V0A1Q93050 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
ATP6V0A1Q93050 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.42■■■□□ 2.14
ATP6V0A1Q93050 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ATP6V0A1Q93050 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ATP6V0A1Q93050 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ATP6V0A1Q93050 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.4■■■□□ 2.14
ATP6V0A1Q93050 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ATP6V0A1Q93050 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.39■■■□□ 2.14
ATP6V0A1Q93050 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ATP6V0A1Q93050 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.39■■■□□ 2.14
ATP6V0A1Q93050 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ATP6V0A1Q93050 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
ATP6V0A1Q93050 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ATP6V0A1Q93050 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.38■■■□□ 2.13
ATP6V0A1Q93050 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms